Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08721 ATGGGGAAAATTGGAAATCAAGATGTGCAACAAGAAGAACAGAGGGAGAACGACGGTGAAGGCTGTTCACGGTGTTCGGTGGTGGTGCTGAGATTATTCAGTTTCAAGTGTTTGTTCATTCTGTTTTTCAGTTTAGCGGCTTTTGTTTCTGGAATCTTCTGGATTCTTCCTAAACATAATTCAACTGAATTAAGCTTTGACGCCAAAGATGTAATTAAGCATAGCGCTACGGTTCAGGCATCCTTCAGGCTGGAAACACCAGTTTCACAGCTTATTCCATACATAGAAAGATTACAAGATGATATATTTGGGGAAATAGCTCTGCCAAATACAAAGGTGGCTATACTATCCATACACCAAAGTGTTGCACCTAGCTTGTCTGATGTGGTATTTGGTGTTCTCTCTGACCCAATGAACATTCCAATAAATCCAGTGTACTTGAGCGTGCTGAGTTCATCACTAACTGAACTGTTTCTCCAGCAATCCAATCTGACTTTCTCAACATCAGTATTTGGAAATGCATCTTTGTTTGAAATCTTGAAGATTCCTGGTGGGTTAACTGTAAGACCAGTGCAGTCTGCTTCTATTTGGCAGATACCCGAGATTCTGTTTAATTTTACTCTTAATAATTCAATATCTGAAGTCCTGGATAAGTTTGACGACTTTGAGGAAGAATTGAAGTTTGGATTGCATCTGAAGCCTGACGAGAATGTGTATGTGCACATAACAAATGCACACGGCTCAACAGTAGCTCGTCCTGTAGTAGTGCAGGCATCAGTCATGCGAGGGTTTGAGAGCGTTTTGCCACAAAGATTGAAACAAATAGCTCAAACAATAAGAGGATCTGCGAGAAAAAATCTTGGCCTTAATAACTTGGTTTTTGGCAGAGTCAAAGAAATCAGGTTATCTTCTTTATTAAAGGATACACTACATGCTCACCCACCTTCTCCCGCTCCTGCCCCATCCCCAAAGTTAGTTGATCACTCTGAGCCATTAATTTCACCATACCATGCTCCTTTTCATTCTCCAATATCCCCAGAAACTTCTGAGAAACCTCCTTGTTTTGACTGTGATGTATTCTCACCTTCACCATCCATTATGACCGAGCATCCTGCATATCCCTGTCTATACAATTGCTTCAAGCTCCTCCAAGATGAGGAGAAATCTAAAAAGTTGGTGTCTCGCGTACTTGCTCCGCCCTCTCAATCTTCAGCAGGCAGCGTTTTCCACACAGAAATCTTGCTAATGGGATTTTGTTTGCTATTAGTATCTTTTGTTTTTATCAATGATATGAGGATGTGA 1302 0.4094 MGKIGNQDVQQEEQRENDGEGCSRCSVVVLRLFSFKCLFILFFSLAAFVSGIFWILPKHNSTELSFDAKDVIKHSATVQASFRLETPVSQLIPYIERLQDDIFGEIALPNTKVAILSIHQSVAPSLSDVVFGVLSDPMNIPINPVYLSVLSSSLTELFLQQSNLTFSTSVFGNASLFEILKIPGGLTVRPVQSASIWQIPEILFNFTLNNSISEVLDKFDDFEEELKFGLHLKPDENVYVHITNAHGSTVARPVVVQASVMRGFESVLPQRLKQIAQTIRGSARKNLGLNNLVFGRVKEIRLSSLLKDTLHAHPPSPAPAPSPKLVDHSEPLISPYHAPFHSPISPETSEKPPCFDCDVFSPSPSIMTEHPAYPCLYNCFKLLQDEEKSKKLVSRVLAPPSQSSAGSVFHTEILLMGFCLLLVSFVFINDMRM 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08721 433 PANTHER F20B24.21 1 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08721 Vivi-Chr1 250159996 250163850 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08721 1 308 C3H Transcription Factor Family AT3G10810 39.490 1.25e-50 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08721 - - gmx:100804252 524.242