Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08712 ATGCCAAAATCCAAGAGAAACAAGCAAGTTACACTTTCAAAGACAACGAAAAAGGGAAGAGGTCACAAAGAAGTGATTGTGAACGCCATAAGAGACGCAGCTGAGAATTACAATTCGGTATACGTATTTTCTTTTGAGAATATGAGGAATAAGAAATTGAAAGAGTTTAGAGATGAGTTGAAAGCAACTAGTAGGTTTTTTCTTGGATCTAATAAAGTTATGCAAGTTGCTCTTGGCCGTTCTGCTTCTGATGAAATTAAACCTAATCTTCATAAAGTTTCAAAGTTATTGCGTGGAGATGCTGGAATGGTTTTTACTAATATTTCTAAAGAAGAAGTTGAAAGGCTGTTTAATCAATTTGAGGAATTTGATTTTGCAAGAACAGGAGGCATTGCCACCGAAAAGGTGGAACTCAAGGAAGGTCCTTTAGATCAGTTCACTCATGAGATGGAACCTTTTCTCCGGAAGCAAGGCATGCCTGTTCGGTTAAATAAAGGAGTTGTGGAGCTTGTTTCCGACTTTGTTGTTTGTGAGGAGGGAAAGCCTTTGTCACCTGAAGCAGCTCGCATACTGCGTTTGATGGGAGTCAAGATGGCTACGTTTAAACTGAACCTTGTTTGCAGGTGGAGTGCGGATGATTTTGAACTCTACATTGACGGCCCTGGCGATTCAGATGTTGAATGCTCATAG 690 0.4 MPKSKRNKQVTLSKTTKKGRGHKEVIVNAIRDAAENYNSVYVFSFENMRNKKLKEFRDELKATSRFFLGSNKVMQVALGRSASDEIKPNLHKVSKLLRGDAGMVFTNISKEEVERLFNQFEEFDFARTGGIATEKVELKEGPLDQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPEAARILRLMGVKMATFKLNLVCRWSADDFELYIDGPGDSDVECS 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08712 229 Pfam Insertion domain in 60S ribosomal protein L10P 126 196 IPR040637 -
Vivi1g08712 229 Gene3D - 125 198 IPR043164 -
Vivi1g08712 229 FunFam Ribosome assembly factor mrt4 29 128 - -
Vivi1g08712 229 SUPERFAMILY Ribosomal protein L10-like 20 144 IPR043141 -
Vivi1g08712 229 Gene3D - 30 212 IPR043141 -
Vivi1g08712 229 Pfam Ribosomal protein L10 20 120 IPR001790 -
Vivi1g08712 229 CDD Ribosomal_P0_like 22 184 IPR033867 GO:0000027
Vivi1g08712 229 FunFam Ribosome assembly factor mrt4 125 198 - -
Vivi1g08712 229 PANTHER MRNA TURNOVER PROTEIN 4 MRTO4 1 220 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08712 35 217 Cytoplasmic Ribosomal Protein Gene Family AT3G11250 21.390 2.93e-10 57.4