Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08700 ATGAAAATATTAAGAAATGGCCTCCAAGGTTTGAAACCAGTGATGCTCATGGTTTTGGTTCAACTTGCCTATGCAGCAGTTAATGTGCTTTACAAGCTTGCCATCGATGATGGAATGACTGTCAAAGTTGCTACTGCTTATCGTTTGGCTTTTGGTTCTGCTTTCACTGTTCCTCTTGCTCTCATTTCTGAAAGAAATAAGAGGCCAAAGCTTAGTTGGAGAGTGCTTTTCATGGCTTTTCTTTGCGGCTTGTTTGGTGGAAGTTTATTTCAAAATCTATTCTATGAGGCTTTGGCTTTAACATCAGCAACATTTGCATCTGCAATCTACAATCTCATTCCTGCCATCACTTTTATCATGGCCATTTCATGCGGTTTTGAAAAATTAAATTTAAGAGCAGCAGCTGGAAAAGCCAAAGTGTTGGGAACTCTAGCAGGAATTGGAGGAGCAATGATGTTGATTTTTCTCAAGGGTGTGGAAATTAATATTTGGCCATTTCATATCAATGTTATGCATCATCATCAACATCAAACTAGCCATGTTGATTATGGTAGTAAAGGGTTGGGTGTTCTATGTGCTGTAGCAAGTTGTTTCTCTTTTGCTCTATGGTTCATAATTCAGGCTAAGATGAGCAAAGAATACCCAAGTCATTACTCAAGTACAGCTTTAATGTCTACAATGGGAGCAATACAAGCCACTGGTTTTGCTCTTTGTTTTGAAAGAGATTGGAGCCAATGGAAGTTGGGTTGGAATATAAGACTTCTAGCCGTTGCATATTCGGGAATCGTTGCGTCTGGATTAGTGGTTATTGTGACATCTTGGTGCATAAAGATGAGAGGCCCACTATTTGCATCTGTTTTCAACCCTTTAATGCTGTTGTTTGTGACTATTGTTGCTTCTTTGATGTTGGAAGAAAAATTATACTTAGGAAGTTTGATTGGAGCAGTGTTGATTGTGTGTGGATTATATATGGTTCTTTGGGGTAAGAGTAAAGAGATGAAAAAGATTGCTCAATTGGCTACATCAAAAATTGCACAAGAAGCTGAAGAAGATATTGAAGTTGTTGTAATGTCTAGACCAATAGTACAAGATCATGATAAATTACATGTCTCTAACAACAATCACATTGAAGTTGATAAAGAACATGATTCAAAAAATGGAGAAATTAAGAGTATTGGAGATGATCCAAAGTAA 1194 0.3735 MKILRNGLQGLKPVMLMVLVQLAYAAVNVLYKLAIDDGMTVKVATAYRLAFGSAFTVPLALISERNKRPKLSWRVLFMAFLCGLFGGSLFQNLFYEALALTSATFASAIYNLIPAITFIMAISCGFEKLNLRAAAGKAKVLGTLAGIGGAMMLIFLKGVEINIWPFHINVMHHHQHQTSHVDYGSKGLGVLCAVASCFSFALWFIIQAKMSKEYPSHYSSTALMSTMGAIQATGFALCFERDWSQWKLGWNIRLLAVAYSGIVASGLVVIVTSWCIKMRGPLFASVFNPLMLLFVTIVASLMLEEKLYLGSLIGAVLIVCGLYMVLWGKSKEMKKIAQLATSKIAQEAEEDIEVVVMSRPIVQDHDKLHVSNNNHIEVDKEHDSKNGEIKSIGDDPK 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08700 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 331 - -
Vivi1g08700 397 PANTHER WAT1-RELATED PROTEIN 12 341 IPR030184 GO:0016020|GO:0022857
Vivi1g08700 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 142 - -
Vivi1g08700 397 Pfam EamA-like transporter family 12 153 IPR000620 GO:0016020
Vivi1g08700 397 Pfam EamA-like transporter family 188 326 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08700 Vivi-Chr1 249600816 249603570 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08700 11 335 Nodulin-like Gene Family AT1G25270 43.385 8.26e-96 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08700 - - gmx:100809587 575.474