Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08699 ATGAGAGATATAAAAAAAATAATGCATGGATTGAAACCAGCTTTGATGATGTTAACGGTTCAGATTGCATTTGCTTCGCTTAATGTTCTTTACAAGCTTGCTATTAACAATGGAATGAGTGTTAGGGTTCTTACGGCTTATCGTCTCATTTTTGCAGCAGCTACTACCATTCCTCTTGCTCTCTTTTTTGAAAGGAAGAACAGACCAAAGCTAACATGGAGAGTTGTTTTTATGTCATTCTTTTGTGGATTATTTGGAGGAAGTTTATTTCAAAACCTATACTATGAATCATTGACATTGATATCCGCAACATTTGCTTCCGCAGTTTATAATCTCATTCCGGCAGTCACATTTATTTTGGCCGTCTCTTTTGGTTATGAAAGATTGAATTTCCAAAGAGCATCAGGAAAGGCTAAGGTGTTGGGAACAATTACCGGAATTGGAGGGGCAATGATATTAACATTTCTCAAAGGTGTTGAAATTAATATTTGGACTTTCCATATTAATCTCTTGCATAAGGGTAAAAATGGAATAATAAATGATGACTCTGGTAGTAAATTGTTGGGTATCTTTTTTGGTCTTGGAAGTTGCTTCTGTTTTGCATTATGGCTCATCATTCAGGCTAAAATGAGCAAAGAATATCAAGGGCATTTTTCAAGTTCAGCATTGATGAATTTAATGGGGGCAACTCAAGCTACAATTTTTGCCCTTTGTATGGAGAAAGATTGGAGCCAATGGAGATTAGGTTGGAGTATTAGGCTTCTAACTGCAGTATATTCAGGAGTTGTTGTTTCTGGATTAATGATTGTTATAATTGCATGGTGTGTAGGGATGAGAGGTCCACTATATGCCTCAATTTTCAACCCTTTGATGTTAGTGCTAGTGGCCATTGCTGGTTCTTTGATGTTGGATGAGAACTTATATTTAGGAAGTGTGATTGGAGCAGTGTTGATAATGGTTGGATTGTACATGGTGTTATGGGGGAAGAGCAAAGAAATGAAGAAAGTGACTCATGTAGAAATCACTTCTGAATCTGAAGAAATTGAGATTGTTGTTTCGTCGAACACCGACGACATCAATGGCAATATTGAGGGCAACATTGTTGACAAGAATGATGAACATGAAGGGAAAGAGACTGAAAATAATATTGGAAAAGAAGAATTGGTTTCAAGTTTTCAAGTGAAGTCTTGA 1191 0.3652 MRDIKKIMHGLKPALMMLTVQIAFASLNVLYKLAINNGMSVRVLTAYRLIFAAATTIPLALFFERKNRPKLTWRVVFMSFFCGLFGGSLFQNLYYESLTLISATFASAVYNLIPAVTFILAVSFGYERLNFQRASGKAKVLGTITGIGGAMILTFLKGVEINIWTFHINLLHKGKNGIINDDSGSKLLGIFFGLGSCFCFALWLIIQAKMSKEYQGHFSSSALMNLMGATQATIFALCMEKDWSQWRLGWSIRLLTAVYSGVVVSGLMIVIIAWCVGMRGPLYASIFNPLMLVLVAIAGSLMLDENLYLGSVIGAVLIMVGLYMVLWGKSKEMKKVTHVEITSESEEIEIVVSSNTDDINGNIEGNIVDKNDEHEGKETENNIGKEELVSSFQVKS 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08699 396 PANTHER WAT1-RELATED PROTEIN 12 342 IPR030184 GO:0016020|GO:0022857
Vivi1g08699 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 331 - -
Vivi1g08699 396 MobiDBLite consensus disorder prediction 364 383 - -
Vivi1g08699 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 152 - -
Vivi1g08699 396 MobiDBLite consensus disorder prediction 367 383 - -
Vivi1g08699 396 Pfam EamA-like transporter family 12 153 IPR000620 GO:0016020
Vivi1g08699 396 Pfam EamA-like transporter family 188 326 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08699 Vivi-Chr1 249528470 249530816 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08699 11 364 Nodulin-like Gene Family AT1G25270 39.106 2.37e-98 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08699 - - gmx:100809587 474.552