Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08698 ATGCATGGATTGAAACCAGCTTTGATGATGTTAACGGTTCAGATTGCATTTGCTTCTCTTAATGTTCTTTACAAGCTTGCTATTAACGATGGAATGAGTGTTAGGGTTCTTACGGCTTATCGTCTCATTTTTGCAGTAGCTACTACCATTCCACTTGCTCTCTTTTTTGAAAGGAAGAACAGACCAAAGCTAACATGGAGAGTTGTTTTTATGTCATTCTTTTGTGGATTATTTGGAGGAAGTTTATTTCAAAACCTATACTATGAATCATTGGCATTGATATCGGCGACATTTGCTTCCGCAGTTCATAATCTTATTCCGGCCGTCACATTTATCTTGGCCGTCTCTTTCGGTTATGAAAGATTGAATTTCCAAAGAGCATCAGGAAAGGCTAAGGTGTTGGGAACAATTACAGGAATTGGAGGGGCAATGATATTAACATTTCTCAAAGGTGTTGAAATTAATATTTGGACCTTCCATATTAATCTCTTGCACAAGGGTAAAAATGGAATAATAAATGATGACTCTGGTAGTAAATTGTTGGGTATCTTTTTTGGTCTTGGAAGTTGCTTTTGTTTTGCATTATGGCTCATCATTCAGGCTAAAATGAGCAAAGAATATCAAGGGCATTTTTCAAGTTCAGCATTGATGAATTTAATGGGGGCAACTCAAGCTACAATTTTTGCTCTTTGTATGGAGAAAGATTGGAGCCAATGGAGATTAGGTTGGAGTATTAGGCTTCTAACTGCAGCATATTCAGGAGTTGTGGCTTCTGGATTAATGGTTGTTATAATTGCATGGTGTGTAGGGAAGAGAGGTCCACTATATGCCTCTATTTTCAACCCTTTGATGTTAGTGCTAGTGGCCATTGTTGGTTCTTTGATGTTGGATGAGAATCTATATTTAGGAAGTGTAATTGGAGCAGTGTTGATAATGGTAGGATTGTACATGGTGTTATGGGGGAAGAGCAAAGAAATGAAGAAAGTGACTCATTTAGAAATCACTTCTGAATCTGAAGAAATTGAGATTGTTGTTTCGTCGAACACCGGCGACATCAATGGCAAGATTGAGGGCAACATTGTTGACAAGAATGATGAACATGAAGGGAAAGAGACTGAGAATAATGGAAAAGAAGAATTGGTTTCAAGTCTTCAAGTGAAGTCTTGA 1167 0.377 MHGLKPALMMLTVQIAFASLNVLYKLAINDGMSVRVLTAYRLIFAVATTIPLALFFERKNRPKLTWRVVFMSFFCGLFGGSLFQNLYYESLALISATFASAVHNLIPAVTFILAVSFGYERLNFQRASGKAKVLGTITGIGGAMILTFLKGVEINIWTFHINLLHKGKNGIINDDSGSKLLGIFFGLGSCFCFALWLIIQAKMSKEYQGHFSSSALMNLMGATQATIFALCMEKDWSQWRLGWSIRLLTAAYSGVVASGLMVVIIAWCVGKRGPLYASIFNPLMLVLVAIVGSLMLDENLYLGSVIGAVLIMVGLYMVLWGKSKEMKKVTHLEITSESEEIEIVVSSNTGDINGKIEGNIVDKNDEHEGKETENNGKEELVSSLQVKS 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08698 388 PANTHER WAT1-RELATED PROTEIN 5 335 IPR030184 GO:0016020|GO:0022857
Vivi1g08698 388 Pfam EamA-like transporter family 181 319 IPR000620 GO:0016020
Vivi1g08698 388 Pfam EamA-like transporter family 5 146 IPR000620 GO:0016020
Vivi1g08698 388 MobiDBLite consensus disorder prediction 358 377 - -
Vivi1g08698 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 145 - -
Vivi1g08698 388 MobiDBLite consensus disorder prediction 356 388 - -
Vivi1g08698 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 238 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08698 Vivi-Chr1 249491331 249494733 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08698 4 343 Nodulin-like Gene Family AT1G25270 40.698 3.46e-99 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08698 - - gmx:100809587 471.085