Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08697 ATGAGAGATATAAGAAAAATAATGCATGGATTGAAACCAGCTTTGATGATGTTAACGGTTCAGATTGCATTTGCTTCTGTTAATGTTCTTTACAAGCTTGCTATTAACGATGGAATGAGTGTTAGGGTTCTTACTGCTTATCGTCTCATTTTTGCAGCAGTTACTACCATTCCTCTTGCTCTCTTTTTTGAAAGGAAGAACAGACCAAAGCTTACATGGAGAGTTGTTTTTATGTCATTCTTTTGTGGATTATTTGGAGGAAGTTTATTTCAAAACCTATACTTTGAGTCATTGGCATTGATATCGGCGACATTTGCTTCCGCGGTTTATAATCTCATTCCAGCCGTCACATTTATCTTGGCCGTCTCTTTCGGTTATGAAAGATTGAATTTCCAAAGAACATCAGGAAAGGCTAAGGTGTTAGGAACAATAACAGGAATTGGAGGGGCAATGATGCTAACATTTCTCAAAGGTGTTGAAATTAATATTTGGTCCTTCCATATTAATCTCTTGCATAAGGGCAAAAATGGAACAGTAAATGATGACTCTGGTAGTAAATTGTTGGGTATCTTTTTTGGTCTTGGAAGTTGCTTCTGCTTTGCATTATGGCTCATCATTCAGACTAAAATGAGCAAAGAATATCAAGGGCATTATTCAAGTTCAGCATTGATGAATTTAATGGGGGCAACTCAAGCTACAATTTTTGCCCTTTGTATGGATAAAGATTGGAGCCAATGGAGATTAGGTTGGAGTATTAGGCTTCTAACTGCAGCATATTCAGGAGTTGTGGCTTCTGGATTAATGATTGTTATAATTGCATGGTGTGTAGGGATGAGAGGTCCACTATATGCCTCTATTTTCAACCCTTTGATGTTAGTGCTAGTGGCCATTGCTGGCTCTTTGATGTTGGATGAGAATCTATATTTAGGAAGTGTAATTGGAGCAGTGTTGATAATGGTTGGATTGTACATGGTGTTATGGGGGAAGAGCAAAGAAATGAAGAAAGTGACTCATTTAGAAATCACTTCTGAATCTGAAGAAATTGAGATTGTTGTTTCGTCGAACACCTGCGACATCAATGGCAAGATCGAGGGCAACATTGTTGACAAGAATGATGAACATGAAGGGAAAAAGACTGAGAATAATGGAAAAGAAGAATTGGTTTCAAGTCATCAAGTGAAGTCTTGA 1188 0.3763 MRDIRKIMHGLKPALMMLTVQIAFASVNVLYKLAINDGMSVRVLTAYRLIFAAVTTIPLALFFERKNRPKLTWRVVFMSFFCGLFGGSLFQNLYFESLALISATFASAVYNLIPAVTFILAVSFGYERLNFQRTSGKAKVLGTITGIGGAMMLTFLKGVEINIWSFHINLLHKGKNGTVNDDSGSKLLGIFFGLGSCFCFALWLIIQTKMSKEYQGHYSSSALMNLMGATQATIFALCMDKDWSQWRLGWSIRLLTAAYSGVVASGLMIVIIAWCVGMRGPLYASIFNPLMLVLVAIAGSLMLDENLYLGSVIGAVLIMVGLYMVLWGKSKEMKKVTHLEITSESEEIEIVVSSNTCDINGKIEGNIVDKNDEHEGKKTENNGKEELVSSHQVKS 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08697 395 Pfam EamA-like transporter family 188 326 IPR000620 GO:0016020
Vivi1g08697 395 Pfam EamA-like transporter family 12 154 IPR000620 GO:0016020
Vivi1g08697 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 153 - -
Vivi1g08697 395 MobiDBLite consensus disorder prediction 369 395 - -
Vivi1g08697 395 PANTHER WAT1-RELATED PROTEIN 12 342 IPR030184 GO:0016020|GO:0022857
Vivi1g08697 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08697 Vivi-Chr1 249426086 249428534 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08697 11 350 Nodulin-like Gene Family AT1G25270 40.988 2.21e-100 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08697 - - gmx:100809587 479.944