Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08695 ATGATGAAGGACAATATATGTAACATATTGCAGGGTTTGAAACCAACGTTGTTGATGGTTATGGTTCAAATAGCATTTGCTGGTGTTAATATTCTCTACAAACTTGCTGTTAACGATGGCATGAACTTAAGAATCGTCGTTGCATACCGTTTCATATTCTCAACTGCTTTCATAGCTCCACTTGCTTTCATCATTGAAAGGAAGAAGAGGACAAAGATGACATGGAAGATACTGTTTCAATCATTTCTGTGTGGTTTATTTGGAGGTTCATTAGCTCAAAATTTCTACTTACAAGCTTTGGTTTTAACTTCACCAACATTTGCATCAGCCATGGCCAACCTTATACCAGCTATAACTTTTATCATGGCCGTTTCCTTTGGTTTGGAAAAATTAAATTTAAGAACAAGATCTGGAAAGGCAAAGATAATAGGTACAATGACAGGAATTAGTGGAGCAATGGTATTAACATTTGTTAAAGGTGTTGAAATAAATATTGGTTCATTTAATTTAAACCTTTTACATCACCAAAACGGTGTCGTATCAAAGCACTCACCACAAGCTACTACAATCTCCACTAGTAATACTATTTTGGGTTCTCTATGTGCTTTGGCTAGTAGCACCTCTTATGCATTATGGCTCATTATTCATGCAAAGATGAGTGAAAAGTATCCAACTCATTATTCAAGTACAGCATTGATGTCATTTTGGGCTTCATTGCTTTCCATTGTATTTGCCCTTTGTTTTGAAAGAGAGTTTAGTGAGTGGAAGTTGGGGTGGAATATTAGGTTACTAACTGTTGCTTATGCGGGTATAGTGGTTTCTGGAGCAATGATTTGTGTAATTTCATGGTGTGTACACATGAGAGGACCATTGTTTGCATCTGTTTTTAACCCTTTGATGCTTGTATGTGTGGCTTTGGCTAGTTGTACTCTGTTGAATGAGAAACTTCACCTTGGAAGCATTATTGGAGCAGTGTTGATTGTATGTGGGTTATATGCTGTTGTATGGGGAAAAAGTAAAGAGATGAAGAAAAAGAATCAATTAGCTCCATCACAAAGCACTGATGAACTTGACACAGTTGAAATAGTTGTGAGGCATGTATTAGAAGACAAAAGCAACCATACTAACAACAATAGTGATCACAATAATAATTTACATGTTATTAATGATAATGAAAATTCACAAAAAGATCAACATGTACAAAATCAAGAAAAAGAAGGAGGGGTATAG 1230 0.3561 MMKDNICNILQGLKPTLLMVMVQIAFAGVNILYKLAVNDGMNLRIVVAYRFIFSTAFIAPLAFIIERKKRTKMTWKILFQSFLCGLFGGSLAQNFYLQALVLTSPTFASAMANLIPAITFIMAVSFGLEKLNLRTRSGKAKIIGTMTGISGAMVLTFVKGVEINIGSFNLNLLHHQNGVVSKHSPQATTISTSNTILGSLCALASSTSYALWLIIHAKMSEKYPTHYSSTALMSFWASLLSIVFALCFEREFSEWKLGWNIRLLTVAYAGIVVSGAMICVISWCVHMRGPLFASVFNPLMLVCVALASCTLLNEKLHLGSIIGAVLIVCGLYAVVWGKSKEMKKKNQLAPSQSTDELDTVEIVVRHVLEDKSNHTNNNSDHNNNLHVINDNENSQKDQHVQNQEKEGGV 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08695 409 MobiDBLite consensus disorder prediction 377 396 - -
Vivi1g08695 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 156 - -
Vivi1g08695 409 Pfam EamA-like transporter family 15 156 IPR000620 GO:0016020
Vivi1g08695 409 Pfam EamA-like transporter family 197 335 IPR000620 GO:0016020
Vivi1g08695 409 PANTHER WAT1-RELATED PROTEIN 15 347 IPR030184 GO:0016020|GO:0022857
Vivi1g08695 409 MobiDBLite consensus disorder prediction 372 409 - -
Vivi1g08695 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08695 Vivi-Chr1 249325467 249328954 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08695 13 359 Nodulin-like Gene Family AT1G25270 42.363 5.78e-94 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08695 - - tpra:123910665 608.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g08695 1 249325467 249328954 Vivi1g08695 1 249325467 249328954 ECH