Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08689 ATGGCTGAAATTCAACACCATGCAACTTCATTACCTCGTAGTGAATCAAAAGTATACAACATGGATGTTGAAAAGAATGAAGAAAAAATTGATGAAAAGGATTATACTCAAAGAGCTCAATGGCTTAGAGCAGCTGTATTAGGTGCTAATGATGGATTACTCTCAACAGCCTCCTTAATGATGGGTATTGGAGCGGTTAACAAAGATGTTAAGACAATGATTCTGACAGGAATTGTTGGTCTTGTTGCTGGTGCATGTAGCATGGCAATAGGTGAATTTGTGTCTGTCTTTTCACAATATGATATTGAGCTTTCTCAAATGAAAAGACAAGGGAATATTTCTCAGAAAGATAAGTTGCCTAACCCTTATTACGCGGCGTTCGCCTCGGCGGTGGCGTTTGCGGTCGGCGCGTTGGTGCCGTTGCTCGGCGCGGCGTTTGTGAAAGATTATAGGGTTAGGTTGGGAGTTGTGGTTGGTGTGGTGAGTGTTGCTTTGTTTGGGTTTGGATTGTTGAGTGGTTTTCTTGGGAAAGCACCTTTGGTTAAGTCTTCTTTTAGGGTTTTGATTGGTGGATGGCTTGCTATGTCTCTTACTTTTGGTTTAACTAAGCTTGTGAACCATGTTGGAGTTTGA 633 0.4186 MAEIQHHATSLPRSESKVYNMDVEKNEEKIDEKDYTQRAQWLRAAVLGANDGLLSTASLMMGIGAVNKDVKTMILTGIVGLVAGACSMAIGEFVSVFSQYDIELSQMKRQGNISQKDKLPNPYYAAFASAVAFAVGALVPLLGAAFVKDYRVRLGVVVGVVSVALFGFGLLSGFLGKAPLVKSSFRVLIGGWLAMSLTFGLTKLVNHVGV 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08689 210 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 24 207 IPR008217 GO:0005384|GO:0030026
Vivi1g08689 210 Pfam VIT family 107 202 IPR008217 GO:0005384|GO:0030026
Vivi1g08689 210 Pfam VIT family 42 110 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08689 Vivi-Chr1 249159442 249160301 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08689 13 210 Nodulin-like Gene Family AT3G43660 65.327 8.30e-90 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08689 K22736 - gmx:100811713 251.136