Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08688 ATGGTTGGAAGTGTTGATGTTTTGGTTGATGATTTGAGCATTAACAGAGCAGTTGATGTATTGCCTGATGAATTTGATGTATCTGCCATTATCAAAGATCCTGTGCCTCCTGTAGTTGCAGAGACTAATGGCAAGGTGGAGGCTCAGTTTAATGCAGGAAATGAGAAAAGAGAAATAGTTTTGGGAAGAAATATTCATACCTCATGTCTTGAAGTCACGGAGCCAGAAGATGATGATGACATTACTGGGGATCGTGATGCTCATATGGCAAGTGTGTTGGCCAGATACAGAAAATCTTTAACTGAAAGGACAAAGTATCATTTAGGCTACCCCTATAATTTGGATTTCGATTACGGTGCACTCTCTCAACTTCAGCATTTTTCCATAAACAACCTTGGAGATCCATTTATCGAAAGCAATTATGGTGTCCACTCCCGGCAGTTTGAAGTTGGTGTTTTGGATTGGTTTGCCAGATTATGGGAACTGGAGAAAAATGAGTATTGGGGCTATATAACAAACTGCGGCACAGAAGGCAATCTTCATGGCATCCTAGTTGGGAGAGAGGTGTTACCAGATGGGATTTTGTATGCCTCGCGGGAGTCACATTATTCAATTTTTAAAGCTGCTCGTATGTACCGAATGGAATGTGAGAAGATTGAGACTCTTAATTCAGGCGAGATTGATTGTGATGATTTCAAGGCCAAACTTCTTTGTCACCAGGACAAGCCAGCAATTATAAATGTGAACATAGGTACAACTGTGAAAGGAGCTGTGGATGATCTTGATCTGGTTATACAGAAACTTGAAGAAGCTGGATTTTCACATGACAGATTCTACATCCACGTTGATGGGGCATTGTTTGGTCTCATGATGCCTTTTGTGAAACGAGCTCCAAAAGTAACTTTTAAGAAGCCTATTGGAAGTGTGAGTGTTTCTGGCCACAAATTTGTGGGGTGCCCCATGCCTTGTGGGGTGCAGATAACAAGATTGGAGCATATCAATGCTCTTTCCAGGAATGTGGAATACCTTGCATCTAGGGATGCCACAATCATGGGTAGTCGAAATGGCCACGCTCCCATATTCCTTTGGTACACCTTGAACCGGAAAGGATACAAAGGCTTCCAGAAAGAAGTGCAGAAATGCTTGCGAAATGCATTCTACTTCAAAGACCGCCTTATTGATGCTGGGATCGGTGCAATGCTTAATGAGCTTAGCAGCACGGTTGTATTTGAGCGGCCACACGATGAGGAATTTATCCGCAAATGGCAGTTAGCATGCAAGGGGAACATCGCTCATGTGGTGGTGATGCCAAACGTCACTATTCAGAAACTTGATGAGTTTCTAAACGAGCTCGTGCAGAAGCGTGTTACTTGGTTTGAAGAGGGGAAGTATCAGCCTTATTGTATCGCATCAGATGTAGGTGAAAACAGTTGCTTATGTGCTCTACATAAGTGA 1455 0.4275 MVGSVDVLVDDLSINRAVDVLPDEFDVSAIIKDPVPPVVAETNGKVEAQFNAGNEKREIVLGRNIHTSCLEVTEPEDDDDITGDRDAHMASVLARYRKSLTERTKYHLGYPYNLDFDYGALSQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKNEYWGYITNCGTEGNLHGILVGREVLPDGILYASRESHYSIFKAARMYRMECEKIETLNSGEIDCDDFKAKLLCHQDKPAIINVNIGTTVKGAVDDLDLVIQKLEEAGFSHDRFYIHVDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAFYFKDRLIDAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVVMPNVTIQKLDEFLNELVQKRVTWFEEGKYQPYCIASDVGENSCLCALHK 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08688 484 FunFam Serine decarboxylase 1 123 366 - -
Vivi1g08688 484 Gene3D Aspartate Aminotransferase, domain 1 367 455 IPR015422 GO:0003824
Vivi1g08688 484 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 308 329 IPR021115 GO:0016831
Vivi1g08688 484 Pfam Pyridoxal-dependent decarboxylase conserved domain 194 397 IPR002129 GO:0016830|GO:0019752|GO:0030170
Vivi1g08688 484 PANTHER - 49 484 - -
Vivi1g08688 484 SUPERFAMILY PLP-dependent transferases 103 453 IPR015424 -
Vivi1g08688 484 Gene3D - 122 366 IPR015421 GO:0003824
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08688 207 390 Calmodulin-binding Proteins AT1G65960 26.425 3.05e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08688 K25193 - gmx:100795577 873.233