Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08685 ATGTCTCTCTTTGTTTTTGTGTCTCTCCTATTCTCATTCTTAATTGCTGGTTCTAAGGGTCAGCTTCGAATTAGTTTCTACTCAGACACATGTCTTCCAGCAGAATCCATTGTCCGTGATGTTGTTAGAGAGGCTTCTCTTTCTGACCCGACCATGCCTGCTGCCTTGCTTAGGCTTCAATTTCATGATTGCTTTGTTGAGGGATGTGATGGTTCCATTCTGGTTGATAATGTTCCAGAACCAGAAAAAGATGCATTTGCACATCAAGGTCTTAAAGGGCTTGATGTGATAGAAAAAGCTAAGGCGAAATTGGAAGAAGCTTGTCCAGGAGTGGTTTCTTGTGCAGATATTGTTGCATTGGCAGCAAGAGAAGCAATTGTCATGGCAAATGGACCTTGGTACAAAGTTCCTACAGGGAGGAGAGACGGATTTGTATCCGATAAATCTCTTGCAGATGATATGCCAGATGTCAGTGATTCAATTCTGCAACTCAAAACCAAGTTTATGGACAAGGGTCTCACAGATAAAGACCTTGTCCTTCTCAGTGCTGCACATACGATAGGAACAACAGCGTGTTTCTTCATGACAAAAAGACTATACAACTTTTTTCCTGGTGGTGGATCAGACCCAGCTATAAATCCAAATTTCCTGCCAGAACTTCAGGCAAAGTGCCCACGGACGGGAGACGTGAACGACCGTTTAGCCATGGACATAACGACTGAAAGAAAATTCGACAAGAACATATTGAGAAACATAAGGGAAGGTTTTGCAGTGTTAGAATCAGATGCAAGACTTAACGATGACGCAAGAACGAAAGCTGTGATGGAATCCTACTTAGGTCCCTTCACTCCAGTATTAGGACCTTCTTTCGAAAATGATTTTGTCGAGTCAATTGTTAAAATGGGACAAATTGGTGTCAAGACAGGTTCCGATGGAAACATTAGGCGTGTCTGCTCGAAACTCGATTGA 969 0.4252 MSLFVFVSLLFSFLIAGSKGQLRISFYSDTCLPAESIVRDVVREASLSDPTMPAALLRLQFHDCFVEGCDGSILVDNVPEPEKDAFAHQGLKGLDVIEKAKAKLEEACPGVVSCADIVALAAREAIVMANGPWYKVPTGRRDGFVSDKSLADDMPDVSDSILQLKTKFMDKGLTDKDLVLLSAAHTIGTTACFFMTKRLYNFFPGGGSDPAINPNFLPELQAKCPRTGDVNDRLAMDITTERKFDKNILRNIREGFAVLESDARLNDDARTKAVMESYLGPFTPVLGPSFENDFVESIVKMGQIGVKTGSDGNIRRVCSKLD 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08685 322 FunFam Peroxidase 155 301 - -
Vivi1g08685 322 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g08685 322 PRINTS Haem peroxidase superfamily signature 112 129 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g08685 322 PRINTS Haem peroxidase superfamily signature 130 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g08685 322 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g08685 322 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g08685 322 SUPERFAMILY Heme-dependent peroxidases 21 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vivi1g08685 322 PRINTS Plant peroxidase signature 176 188 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g08685 322 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g08685 322 PRINTS Plant peroxidase signature 251 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g08685 322 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g08685 322 PRINTS Plant peroxidase signature 130 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g08685 322 PRINTS Plant peroxidase signature 235 250 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g08685 322 PRINTS Plant peroxidase signature 92 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g08685 322 PRINTS Plant peroxidase signature 111 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g08685 322 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g08685 322 PANTHER PEROXIDASE 25-RELATED 11 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g08685 322 Pfam Peroxidase 38 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g08685 322 Gene3D Peroxidase, domain 2 155 301 - -
Vivi1g08685 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 177 187 IPR019793 -
Vivi1g08685 322 FunFam Peroxidase 25 167 - -
Vivi1g08685 322 ProSiteProfiles Plant heme peroxidase family profile. 21 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g08685 322 Gene3D - 25 320 - -
Vivi1g08685 322 CDD secretory_peroxidase 21 320 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08685 Vivi-Chr1 248968404 248969807 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08685 1 319 Peroxidase AT1G77100 52.648 5.77e-109 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08685 K00430 - gmx:547549 456.832