Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08683 ATGTCTCCCTTTGTTTTTGTGTCTCTCCTATTCTTATTCGTAATTCATGGTTCTAAGGGTCAGCTTAAAATTGATTTCTACTCGGACAAATGTTTTCTAGCAGAACTCATTGTCCATGATGTTGTTAGAAAAGCTGCTCTTTCTGACCCGACCGTGCCTGCTGCTTTGCTTAGGCTTCATTTTCATGACTGCTTTGTTGAGGGATGTGATGGTTCCATTCTGATTGATAATGTTCCGGAACCAGAAAAAGATGCATTTGAACATCTAGGTCTTAGAGGATTTGATGTGATAGAAAAAGCTAAGGCAAAATTGGAAGAATCTTGTCCAGGAGTGGTTTCTTGTGCAGATATTGTTGCATTGGCAGCAAGAGAAGCAATTTCCATGGCAAATGGACCTTGGTACATAGTTCCTACAGGGAGGAGAGATGGATTAGTTTCCGATAAATCTCTTGCAGGTGATATACCAGATGTTCGTGATTCAATTCAGCAAATCAAAACCAAGTTTAGGAACAAGGGTCTCACAGATAAAGACCTTGTCCTTCTCAGTGCTGCACATACAATAGGAACAACAGCATGTTTCTTCATGAAAAAAAGACTATACAACTTTTCTCCATCTGGTGGTGGATCCGACCCAGCTATAAGTCCAAATTTCCTTCCAGAACTTCAGGCAAAGTGCCCTCGGACGGGACACGAGAACGACCGTTTAGCCATCGACATAACGACTGAAACAACATTCGACGATAACATATTGAGAAACATAAGGAAAGGCTTTGCTGTGCTAGAATCTGATGCAAGACTTAACGACGATGCAGAAACAAAGGCTGTGATTGAATCATACTTAGCTCCCCTCGCTCCAATATTTGGACCTCATTTCGGATTTGATTTTACTCAGGCAATTGTTAAAATGGGACAAATTGGTGTCAAGACAGGTTCCGATGGAAACATTAGGCGCGTCTGCTCGAAACTCAATTGA 972 0.4146 MSPFVFVSLLFLFVIHGSKGQLKIDFYSDKCFLAELIVHDVVRKAALSDPTVPAALLRLHFHDCFVEGCDGSILIDNVPEPEKDAFEHLGLRGFDVIEKAKAKLEESCPGVVSCADIVALAAREAISMANGPWYIVPTGRRDGLVSDKSLAGDIPDVRDSIQQIKTKFRNKGLTDKDLVLLSAAHTIGTTACFFMKKRLYNFSPSGGGSDPAISPNFLPELQAKCPRTGHENDRLAIDITTETTFDDNILRNIRKGFAVLESDARLNDDAETKAVIESYLAPLAPIFGPHFGFDFTQAIVKMGQIGVKTGSDGNIRRVCSKLN 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08683 323 PANTHER PEROXIDASE 25-RELATED 11 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g08683 323 Pfam Peroxidase 39 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g08683 323 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g08683 323 PRINTS Plant peroxidase signature 92 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g08683 323 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g08683 323 PRINTS Plant peroxidase signature 130 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g08683 323 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g08683 323 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g08683 323 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g08683 323 PRINTS Plant peroxidase signature 111 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g08683 323 PRINTS Plant peroxidase signature 176 188 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g08683 323 Gene3D - 25 323 - -
Vivi1g08683 323 Gene3D Peroxidase, domain 2 155 302 - -
Vivi1g08683 323 CDD secretory_peroxidase 21 321 IPR033905 GO:0004601|GO:0042744
Vivi1g08683 323 ProSiteProfiles Plant heme peroxidase family profile. 21 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g08683 323 PRINTS Haem peroxidase superfamily signature 112 129 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g08683 323 PRINTS Haem peroxidase superfamily signature 130 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g08683 323 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g08683 323 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g08683 323 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g08683 323 FunFam Peroxidase 25 176 - -
Vivi1g08683 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 177 187 IPR019793 -
Vivi1g08683 323 FunFam Peroxidase 155 302 - -
Vivi1g08683 323 SUPERFAMILY Heme-dependent peroxidases 21 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08683 Vivi-Chr1 248962408 248964180 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08683 5 323 Peroxidase AT1G77100 52.174 3.21e-105 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08683 K00430 - gmx:100786233 429.869