Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08657 ATGAGTCAAGTTTTTAGTGATGGAGTTGTGGCAAGAGTCACTGAGGAGATAAATAGCAATCCTTCTTCACATAGACATGCTGAAAATATTATTCCTCATAGGCACAAAGTTGCATCTCCTCCTAGGCAAACACTTTTCCAAGAGTTCAAGCATAATTTCAATGAAACATTCTTCTCTGATGACCCTTTTGGCAAGTTTAAGAATCAAAAAGGATCAAGAAGGTTTATTCTTGGACTCGAGTCTATTTTCCCGATTTTCGATTGGGGAAGAGGCTACAATTTGAAGAGTTTCAAGGGTGATTTGATTGCTGGACTCACCATTGCAAGTCTTTGCATTCCTCAGGATATTGCATATGCAAAGCTTGCAAATTTGGATCCACAGTATGGACTATATACAAGTTTTGTTGCTCCACTTGTGTATGCTTTCATGGGAAGTTCAAGAGATATTGCTATAGGACCAGTAGCTGTGGTGTCTCTCCTGCTTGGCACCTTGCTAACAGATGAAATCCCTAACTACAAAAGTCATGACTATCTTCGTCTTGCGTTTACCGCGACTTTCTTTGCAGGAATCACTCAAATGGCACTTGGACTTTTAAGGCTCGGTTTCTTGATTGATTTCCTATCTCATGCTGCCATTGTTGGATTCATGGGGGGAGCGGCCGTTACTATTGCGCTCCAACAACTTAAAGGTCTTCTTGGCGTCAAAGACTTCACTAAGAAAACCGATATTATTTCTGTCATGAGATCAGTTTTTAAGGCAGCCCACCACGGCTGGAATTGGGAAACAATATTGATTGGAGTAACATTCTTGGCTTTCCTTCTTACAACAAAGTATATTGCTAAGAAGAAAAAGAATCTCTTTTGGGTGGCTGCAATATCTCCTATGATATGTGTTATTGTTTCTACTTTTTGTGTTTACATTACAAGGGCTGACAAGAAAGGAGTAGCAATTGTGAAACATATTAAAAAGGGTGTGAATCCAGCATCTGCTCATGAAATATTTTTCAGTGGACATTATCTTACTGCTGGTATTAGGATTGGTCTGATTTCTGGTATGGTCGCACTCACGGAAGCTGTGGCCATTGGAAGAACATTTGCTGCTATGAAAGACTATTCGTTGGACGGTAACCGAGAAATGGTGGCACTAGGAACAATGAATGTTATTGGTTCATTAACATCTTGTTATGTAGCTACAGGATCATTTTCGCGTTCGGCTGTGAACTATATGGCTGGTTGTAAAACTGCTGTATCAAACATTGTTATGTCCATAGTTTTGTTGTTAACCCTATTGGTGATTACACCGCTATTCAAGTATACTCCAAACGCAGTGCTTGCATCGATTATCATAGCTGCTGTGATGAGCCTTATCGATATTCAGGCAGTTATTCTTCTTTGGAAGATTGACAAATTCGACTTTCTAGCTTGTATGGGAGCCTTCTTTGGTGTCATCTTCAAAAGTGTTGAAATTGGCCTTCTAATCGCGGTGGCGATATCTTTTGCCAAAATTCTCTTACAAGTAACGAGGCCAAGGACCGCGGTACTTGGGAAGCTTCCGGGGACAACTGTTTATCGTAACGTCCTGCAATATCCAAAAGCAGCTCAGATTCCCGGTATGCTCATCGTCAGGGTTGATTCTGCAATCTACTTCTCAAATTCCAACTACATCAAGGACAGAATATTGAAGTGGTTGACTGATGAAGAGGCTCTAAGGACAGCGAGCGAATTTGCCAGTATACAGTATCTCATTGTTGAAATGTCGCCTGTTACTGATATCGACACGAGTGGCATTCATGCCTTCGAAGATTTACTCAAGAGCCTCAAGAAAAAAGATGTCCAGCTTCTTGTGGCGAATCCGGGGCCGATTGTAATTGAGAAGCTTCATGCGTCGGAGTTATCAGGCTTAATCGGAGAAGATAAGATATTTCTAACAGTAGGTGATGCTGTTGCAACTTTTGGTCCAAAGGGTGTAGGTTCTTGA 1977 0.4112 MSQVFSDGVVARVTEEINSNPSSHRHAENIIPHRHKVASPPRQTLFQEFKHNFNETFFSDDPFGKFKNQKGSRRFILGLESIFPIFDWGRGYNLKSFKGDLIAGLTIASLCIPQDIAYAKLANLDPQYGLYTSFVAPLVYAFMGSSRDIAIGPVAVVSLLLGTLLTDEIPNYKSHDYLRLAFTATFFAGITQMALGLLRLGFLIDFLSHAAIVGFMGGAAVTIALQQLKGLLGVKDFTKKTDIISVMRSVFKAAHHGWNWETILIGVTFLAFLLTTKYIAKKKKNLFWVAAISPMICVIVSTFCVYITRADKKGVAIVKHIKKGVNPASAHEIFFSGHYLTAGIRIGLISGMVALTEAVAIGRTFAAMKDYSLDGNREMVALGTMNVIGSLTSCYVATGSFSRSAVNYMAGCKTAVSNIVMSIVLLLTLLVITPLFKYTPNAVLASIIIAAVMSLIDIQAVILLWKIDKFDFLACMGAFFGVIFKSVEIGLLIAVAISFAKILLQVTRPRTAVLGKLPGTTVYRNVLQYPKAAQIPGMLIVRVDSAIYFSNSNYIKDRILKWLTDEEALRTASEFASIQYLIVEMSPVTDIDTSGIHAFEDLLKSLKKKDVQLLVANPGPIVIEKLHASELSGLIGEDKIFLTVGDAVATFGPKGVGS 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08657 658 FunFam Sulfate transporter 31 508 654 - -
Vivi1g08657 658 ProSitePatterns SLC26A transporters signature. 126 147 IPR018045 GO:0008271|GO:0008272
Vivi1g08657 658 CDD STAS_SulP_like_sulfate_transporter 529 644 - -
Vivi1g08657 658 NCBIfam sulfate permease 84 647 IPR001902 GO:0016020|GO:0055085
Vivi1g08657 658 Gene3D STAS domain 508 652 IPR036513 -
Vivi1g08657 658 Pfam STAS domain 529 647 IPR002645 -
Vivi1g08657 658 PANTHER SULFATE TRANSPORTER 43 649 IPR001902 GO:0016020|GO:0055085
Vivi1g08657 658 Pfam Sulfate permease family 97 476 IPR011547 GO:0016020
Vivi1g08657 658 SUPERFAMILY SpoIIaa-like 530 652 IPR036513 -
Vivi1g08657 658 ProSiteProfiles STAS domain profile. 528 651 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08657 Vivi-Chr1 248420620 248424392 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08657 22 654 Inorganic Solute Cotransporters AT1G22150 71.767 0.0 917
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08657 K17470 - gmx:100784124 1040.41