Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08656 ATGAGCCATGTTCTTAGTGATGAAACTGTGGCAAAGGAAATGGAAGAAATAAAAAGCAATCATGATAATATTCTTCCACAACATATTCACAAAGTTGCTAGTCCTCCTAAGCAATCACTTTTCCAAGATATCAAACATAATTTCAATGAAACTTTCTTCTCAGATGACCCCTTTGGCAAGTTTAAGAACCAAACAGGTTCAAGAAGGTTTCTTCTTGGACTCCAATCTGTTTTCCCGATTTTCGAGTGGGGAAGATATTACAATCTTCAAAGTTTCAAGGGTGATCTGATTGCTGGACTCACCATTGCAAGTCTTTGCATTCCTCAGGATATCGCGTATGCAAATCTTGCAAATTTGGAACCACATTATGGACTATATACAAGTTTTGTTGCTCCACTTGTGTATGCTTTCATGGGAAGTTCAAGAGATATTGCAATAGGACCAGTAGCTGTTGTGTCTCTTTTGCTTGGCACTTTGCTGACAGATGAAATCCCTAACTTCAAAAGTCATGAATATCTCCGTCTTGTATTTACCGCGACTTTCTTTGCAGGAATCACTCAAATGGCACTTGGACTATTAAGGCTCGGTTTCTTGATTGATTTCCTATCTCATGCTGCCATTGTTGGATTCATGGGTGGAGCTGCCATTACTATTGCACTCCAACAGCTTAAAGGCCTTCTTGGCATAAAACAATTCACTAAGAAAACCGATATTGTTTCTGTCCTGAGATCGGTTTTTAGTGCAGCACACCACGGCTGGAATTGGGAGACAATAGTAATTGGAGTATCATTCTTGGCTTTCCTTCTTACAACAAAGTATATTGCTAAGAAGAATAAGAAACTCTTTTGGGTGGCTGCAATTTCTCCAATGATATGTGTTATTGTCTCTACTTTTTGTGTTTACATTACAAGGGCAGACAAAAAAGGAGTAGCAATTGTGAAACATATAAGAAGGGGTGTGAATCCATCATCTGTTAATGAGATATATTTCAGTGGAAAATATTTAAGTGCTGGTATTAGGATCGGTGTGATATCCGGCATGGTAGCGCTCACGGAAGCTGTGGCTATTGGGAGAACATTTGCTGCTATGAAAGACTATTCAATAGATGGCAACAGAGAAATGGTGGCATTGGGATCAATGAACCTTATCGGTTCGATGACATCTTGTTATGTGGCTACAGGATCCTTTTCGCGTTCGGCTGTGAACTATATGGCTGGTTGTAAAACTGCTGTATCAAACATAGTTATGTCCATAGTGTTGTTGTTAACCTTGTTGGTGATTACACCGCTATTCAAGTACACTCCGAATGCAGTGCTTGCATCGATTATCATAGCTGCTGTAATGAGCCTTATCGATATTCAGGCAGTTATTCTTCTTTGGAAGATCGACAAATTCGACTTTCTAGCATGCATGGGAGCCTTCTTCGGTGTCATCTTCCAAAGTGTTGAGATTGGCCTTCTAATCGCGGTGGCGATATCTTTTGCCAAAATACTTTTACAAGTGACGAGGCCAAGGACCGCGGTACTTGGGAAGCTTCCGGGGACAACTGTTTATAGGAACATTCTGCAATATCCCAAAGCATCTCAGATTCCCGGCATGCTCATCGTCAGGGTTGATTCCGCGATCTATTTCTCAAACTCGAACTACATCAAGGACAGAATATTGAAGTGGCTGACTGATGAAGAGATTCAAAGAACATCCAGCGAATTTCCTAGTATACAGTTTCTCGTCGTTGAAATGTCGCCTGTTACTGATATTGATACTAGTGGCATTCATGCCTTTGAAGATTTACTCAAGAGCCTCAAGAAAAGAGATATTCAGCTTCTATTGGCGAACCCGGGACCAATTGTGATTGAGAAGCTTGATGCGTCGAAGTTATCGGGTTTAATCGGAGAAGATAAAATATTTTTGACAGTAGGTGATGCTGTTGCAACTTTTGGTCCAAAAGGTGCAGAGTTATGA 1962 0.4057 MSHVLSDETVAKEMEEIKSNHDNILPQHIHKVASPPKQSLFQDIKHNFNETFFSDDPFGKFKNQTGSRRFLLGLQSVFPIFEWGRYYNLQSFKGDLIAGLTIASLCIPQDIAYANLANLEPHYGLYTSFVAPLVYAFMGSSRDIAIGPVAVVSLLLGTLLTDEIPNFKSHEYLRLVFTATFFAGITQMALGLLRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGLLGIKQFTKKTDIVSVLRSVFSAAHHGWNWETIVIGVSFLAFLLTTKYIAKKNKKLFWVAAISPMICVIVSTFCVYITRADKKGVAIVKHIRRGVNPSSVNEIYFSGKYLSAGIRIGVISGMVALTEAVAIGRTFAAMKDYSIDGNREMVALGSMNLIGSMTSCYVATGSFSRSAVNYMAGCKTAVSNIVMSIVLLLTLLVITPLFKYTPNAVLASIIIAAVMSLIDIQAVILLWKIDKFDFLACMGAFFGVIFQSVEIGLLIAVAISFAKILLQVTRPRTAVLGKLPGTTVYRNILQYPKASQIPGMLIVRVDSAIYFSNSNYIKDRILKWLTDEEIQRTSSEFPSIQFLVVEMSPVTDIDTSGIHAFEDLLKSLKKRDIQLLLANPGPIVIEKLDASKLSGLIGEDKIFLTVGDAVATFGPKGAEL 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08656 653 Pfam Sulfate permease family 92 471 IPR011547 GO:0016020
Vivi1g08656 653 SUPERFAMILY SpoIIaa-like 525 647 IPR036513 -
Vivi1g08656 653 ProSitePatterns SLC26A transporters signature. 121 142 IPR018045 GO:0008271|GO:0008272
Vivi1g08656 653 NCBIfam sulfate permease 79 642 IPR001902 GO:0016020|GO:0055085
Vivi1g08656 653 Pfam STAS domain 524 642 IPR002645 -
Vivi1g08656 653 ProSiteProfiles STAS domain profile. 523 646 IPR002645 -
Vivi1g08656 653 PANTHER SULFATE TRANSPORTER 38 644 IPR001902 GO:0016020|GO:0055085
Vivi1g08656 653 FunFam Sulfate transporter 31 503 649 - -
Vivi1g08656 653 CDD STAS_SulP_like_sulfate_transporter 524 639 - -
Vivi1g08656 653 Gene3D STAS domain 503 647 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08656 Vivi-Chr1 248357716 248360893 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08656 2 649 Inorganic Solute Cotransporters AT1G22150 71.495 0.0 925
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08656 K17470 - gmx:100784124 1035.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g08656 1 248357716 248360893 Vivi1g08656 1 248357716 248360893 ECH