Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08651 ATGCATGTTTTATTATCCTTAAACTCAAGCTTAAGTTTAATCAACATTTCAAAGTCATACAAACATCATCATAGCCTTCCACTTTCAAATAATCATCAGAGACAACCTCGTACAGTACAGTTTTCTGTCTCATGCAGAGCCACAAAAAGTGTTCCAATTAATCATAAGCTAGATGATGAAGATGGAAACTTGTACAAGATTCTATCTTTGAGTCCTAAAACTGCAACAACAGATGAGATAAAGAGAGCTTATAGAAGAATGGCACTTCAGTATCATCCTGATGTTTGTTACGATGGTTTGAAGAAAGTCGAATCGACTAGGATGTTTGTAAAACTGAATGAAGCTTATAAGATATTGTTGAATCCAAAGCTTAAAGAAGAGTATGATTCTAAGTTATTGGGTTTGGGTGATATGAGAAGAAGTAAATGGATGGAACAAGTTGTTGAGTTGAATAGAAGATCTCATCAACGTAAGGGTGGTGAATCATGGGGTTGTAGAATGAGAGCCAAGAAGAATATGAACAAAGTTCATCAGAATATCTAG 543 0.3481 MHVLLSLNSSLSLINISKSYKHHHSLPLSNNHQRQPRTVQFSVSCRATKSVPINHKLDDEDGNLYKILSLSPKTATTDEIKRAYRRMALQYHPDVCYDGLKKVESTRMFVKLNEAYKILLNPKLKEEYDSKLLGLGDMRRSKWMEQVVELNRRSHQRKGGESWGCRMRAKKNMNKVHQNI 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08651 180 CDD DnaJ 63 121 IPR001623 -
Vivi1g08651 180 Pfam DnaJ domain 63 129 IPR001623 -
Vivi1g08651 180 ProSiteProfiles dnaJ domain profile. 63 132 IPR001623 -
Vivi1g08651 180 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 20 174 - -
Vivi1g08651 180 PRINTS DnaJ domain signature 84 99 IPR001623 -
Vivi1g08651 180 PRINTS DnaJ domain signature 104 124 IPR001623 -
Vivi1g08651 180 PRINTS DnaJ domain signature 66 84 IPR001623 -
Vivi1g08651 180 SMART dnaj_3 62 124 IPR001623 -
Vivi1g08651 180 Gene3D DnaJ domain 49 156 IPR036869 -
Vivi1g08651 180 SUPERFAMILY Chaperone J-domain 60 132 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08651 Vivi-Chr1 248263358 248264161 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08651 65 130 C2H2 Transcription Factor Family AT1G74250 44.118 2.42e-10 56.6