Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08631 ATGGATAGTCTTTGTTGCTTCAACTCTGTCAGCAAGGCTGTTGGATCATGTAGCTCTGGCAAAGGCAAGAGCAATCAGTACCCTCTTAAGTATGGTTTTTGCTTAGTTGAAGGGAAACCAGATCACCCAATGGAGGACTTTCACGTTGCGAAAATCGTACAGTTCCATGGGCGAGAGTTAGGACTTTTCGCCATATTTGACGGACACTCGGGCGACACCGTGCCTGCCTACTTACAAAAACATCTCTTCGCTAATATCTTGAAGGAAGAAGACTTCTGGACCGATCCGAACAGTTCGATCATTGAAGCGTATGAGTCAACAGATCAGGCCATTCTTTCTCACAGTCCTGACTTGGGACGCGGAGGATCGACTGCAGTGACTGCCATTCTTATAAACAACCAGAAGTTATGGATAGCAAACGTTGGAGACTCGCGAGCTGTTCTGTCGAGGAAAGGGGCCGCTATACAGATGAGCATCGATCACGAGCCCAATACTGAAAGACGCATAATCGAGAATAAAGGCGGCTTTGTCTCAAACCTTCCAGGTGATGTTGCAAGAGTGAATGGACAGCTCGCAGTTTCTCGAGCATTCGGAGACAGAAACCTGAAGTCACACTTGCGGTCTGATCCAGACGTACAACCCGACGATATCGATCAAGATACTGAGCTCTTGATACTTGCTAGTGACGGTCTATGGAAGGTAATGGCGAACCAAGAAGCAGTTGATATTGCAATAAAGATAAAAGATCCACAAAAAGCAGCTAAGCATTTAACTGCAGAGGCACTGAAAAGAGAGAGTAGGGATGATATTTCATGCATTGTAGTTCGTTTCAAGTGA 837 0.4588 MDSLCCFNSVSKAVGSCSSGKGKSNQYPLKYGFCLVEGKPDHPMEDFHVAKIVQFHGRELGLFAIFDGHSGDTVPAYLQKHLFANILKEEDFWTDPNSSIIEAYESTDQAILSHSPDLGRGGSTAVTAILINNQKLWIANVGDSRAVLSRKGAAIQMSIDHEPNTERRIIENKGGFVSNLPGDVARVNGQLAVSRAFGDRNLKSHLRSDPDVQPDDIDQDTELLILASDGLWKVMANQEAVDIAIKIKDPQKAAKHLTAEALKRESRDDISCIVVRFK 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08631 278 CDD PP2Cc 31 277 IPR001932 -
Vivi1g08631 278 SMART PP2C_4 22 275 IPR001932 -
Vivi1g08631 278 ProSiteProfiles PPM-type phosphatase domain profile. 30 277 IPR001932 -
Vivi1g08631 278 Gene3D - 10 278 IPR036457 -
Vivi1g08631 278 FunFam Probable protein phosphatase 2C 39 21 278 - -
Vivi1g08631 278 Pfam Protein phosphatase 2C 42 270 IPR001932 -
Vivi1g08631 278 PANTHER PROTEIN PHOSPHATASE 25 277 IPR015655 GO:0004722|GO:0006470
Vivi1g08631 278 SUPERFAMILY PP2C-like 25 278 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08631 Vivi-Chr1 247998337 248000985 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08631 1 278 PP2C-type Phosphatase Gene Family AT1G22280 66.899 9.18e-138 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08631 K17506 - qsa:O6P43_031615 447.588