Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08604 ATGGAGAGCTTAGCACTTCACTCGCTCTCCACTCCTTCAACCACCTTCCTACTCCATCGTCGTCCACAACCCATTTTCAGATCTCAATCCTCTCTTCCGTTTCACCCATCTTCACGCTCAACCCCATCAATCAAATCATCACCAATCTCTCAATCTTTCTCTTTTCCCTCCAAAGCTTCAACCTTTAACCCTTTCTCAAAACCCCATTTCCCAATCCATGCTAATTCATCTCCTCCACCTCCTCCTCCATCACCATCACCACCACAACCCTTGCCAACTATTCTTCAAGGTGCAAAGCCAATTCCTTTTCTGATTTCAATCTCCATAGGTCTCATTGTTCGCTTCTTTGTTCCAAAGCCAGTTGAAGTCACTGCTCAAGCATGGCAGTTGCTTTCAATTTTCCTCTCAACCATAGCTGGGCTTGTTCTAAGCCCGTTGCCTGTTGGTGCTTGGGCTTTTCTGGGCCTGACAACATCTGTGGTGACGAAAACTTTGAGCTTTACAGCTGCATTTAGTGCTTTTACTAATGAAGTGATTTGGTTGATTGTGATATCTTTTTTCTTTGCTCGTGGGTTTGTGAAAACTGGTTTGGGGGATAGGATTGCTACTTATTTTGTGAAATGGATGGGAAAGAGTACTTTGGGGCTTTCTTATGGTTTGGTGTTTAGTGAGGTTCTTATTGCACCTGCTATGCCTAGTACCACTGCTAGAGCTGGTGGTGTTTTCTTGCCTATTATTAAGTCTCTTGCACTCTCTGCTGGGAGTGAGCCTAATAGTCCTACCTCTAAGAGGTTGGGCTCTTTTCTTGTTCAGAACCAATTTCAGTGTGCAGCAAACTCCAGTGCTCTTTTCCTAACTGCTGCTGCTCAAAACCTTCTGTGTATTAAATTAGCTGAAGAGCTTGGGGTGATAATTACAAGCCCTTGGGTTACGTGGTTTAAGGCAGCTAGTTTACCCGCATTCGTTTGTCTTCTTGCTACGCCGTTGATTTTATACAAGATCTGTCCCCCTGAAATTAAGGACACGCCAGAAGCACCTGCCATGGCTACTAAGAAACTGGAAAACATGGGCCCTGTCACTACAAATGAATGGATTATGGTTTCTACAATGCTTTTTGCAGTCTCTTTGTGGATCTTCGGAGATGCTATTGGCATAGCAAGTGCTGTAACTGCGATGGTTGGTTTATCAATCCTCCTCGTAACAGGAGTCCTTGACTGGCAAGACTGCTTGAACGAAAAATCGGCGTGGGATACCTTAGCTTGGTTTGCCATTCTAGTAGGTATGGCAAGTCAGTTGACAAACCTCGGAATTGTCAGCTGGATGTCTGATTGTGTGGCCAACAGCCTTCAAACATTCTCCTTGAGTTGGCCAGCTTCATTGGCTGTTCTTCAGTCTGCTTATTTCTTCATCCACTACCTTTTTGCAAGTCAAACCGGGCACGTAGGGGCTTTGTTCTCCGCATTTCTCGCCATGCAAAGGGCAGCCGGTGTTCCTGGTGTTCTCGCAGCGCTTGCTTTAGGTTATAATACAAATCTTTTCGGTGCAATTTCTCACTACAGCAGTGGTCAAGCGGCTGTGTACTATGGAGCTGGCTATGTCGAACTTCCTGATATATTCAGAACAGGATTCATTATGGCGGTTATTAACGCAATCATTTGGGGAGGTGTTGGCTCTGTGTGGTGGAAATTTTTGGGCTTGTATTGA 1704 0.4507 MESLALHSLSTPSTTFLLHRRPQPIFRSQSSLPFHPSSRSTPSIKSSPISQSFSFPSKASTFNPFSKPHFPIHANSSPPPPPPSPSPPQPLPTILQGAKPIPFLISISIGLIVRFFVPKPVEVTAQAWQLLSIFLSTIAGLVLSPLPVGAWAFLGLTTSVVTKTLSFTAAFSAFTNEVIWLIVISFFFARGFVKTGLGDRIATYFVKWMGKSTLGLSYGLVFSEVLIAPAMPSTTARAGGVFLPIIKSLALSAGSEPNSPTSKRLGSFLVQNQFQCAANSSALFLTAAAQNLLCIKLAEELGVIITSPWVTWFKAASLPAFVCLLATPLILYKICPPEIKDTPEAPAMATKKLENMGPVTTNEWIMVSTMLFAVSLWIFGDAIGIASAVTAMVGLSILLVTGVLDWQDCLNEKSAWDTLAWFAILVGMASQLTNLGIVSWMSDCVANSLQTFSLSWPASLAVLQSAYFFIHYLFASQTGHVGALFSAFLAMQRAAGVPGVLAALALGYNTNLFGAISHYSSGQAAVYYGAGYVELPDIFRTGFIMAVINAIIWGGVGSVWWKFLGLY 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08604 567 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 64 567 IPR030676 -
Vivi1g08604 567 Pfam Sodium:sulfate symporter transmembrane region 104 566 IPR001898 GO:0016020|GO:0022857|GO:0055085
Vivi1g08604 567 MobiDBLite consensus disorder prediction 73 91 - -
Vivi1g08604 567 MobiDBLite consensus disorder prediction 71 91 - -
Vivi1g08604 567 NCBIfam DASS family sodium-coupled anion symporter 119 561 IPR001898 GO:0016020|GO:0022857|GO:0055085
Vivi1g08604 567 MobiDBLite consensus disorder prediction 27 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08604 Vivi-Chr1 246572036 246575467 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08604 1 567 Antiporters AT5G64290 72.456 0.0 791
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08604 - - gmx:100782873 902.508