Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08586 ATGGGAGTTGAGAAGCAAATCATAAGACCTGGAACCGGTCCCAACCCTAGCCGCGGCCAGAGCGTCACCGTTCACTGCACCGGTTACGGTAAAAACGGTGACCTATCTCAGAAGTTCTGGAGCACCAAGGATCCTGGCCAGCAACCATTCACTTTCAAAATCGGCCAAGGTTCTGTCATCAAAGGATGGGATGAAGGTGTCCTTGGCATGCAACTCGGCGAAGTTGCTCGTCTTCGGTGCTCTCCTGATTATGCTTATGGTGCCGGTGGTTTTCCTGCCTGGGGAATACAGCCCAACTCTGTCTTGGAGTTTGAGATCGAGGTCTTAAGTGCACAATGA 339 0.5192 MGVEKQIIRPGTGPNPSRGQSVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFKIGQGSVIKGWDEGVLGMQLGEVARLRCSPDYAYGAGGFPAWGIQPNSVLEFEIEVLSAQ 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08586 112 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 2 111 - -
Vivi1g08586 112 SUPERFAMILY FKBP-like 2 110 - -
Vivi1g08586 112 MobiDBLite consensus disorder prediction 1 22 - -
Vivi1g08586 112 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 14 109 IPR001179 GO:0003755
Vivi1g08586 112 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 19 112 IPR001179 GO:0003755
Vivi1g08586 112 FunFam Peptidylprolyl isomerase 1 112 - -
Vivi1g08586 112 Gene3D - 1 112 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08586 Vivi-Chr1 246182681 246184360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08586 2 110 Calmodulin-binding Proteins AT5G48570 40.000 2.90e-17 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08586 K01802 - pvy:116136918 222.246