Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08574 ATGGTTAAGGGTCATGAGTCTTGGCCTTTCCCAGAGCACGTGGCTTGGCCATCTCTTTATTTGAATGGCGCCAGCACATTGCCGGATCCTAGTTTTTGTAGTCATTCAGGGTATCTGAATCCTGCTCTCGGGGCATTTCCAGGGTTCACAGCTCTTGCTACTCCAAGCCTGCAGACTGATCAGACCAATGAAGTGCGAGGATTCGTTCAGGATCTTAAAACAGAACCGTGTTTGAAAGAAAGAAATCATTACGGAGCTATGCAAAGTACAAATCCTGCATCTTTGCAGAAGAAATTTATTATATTTGACCGGTCTGGTAATAAGACAAGGTTGTTTTATAGTCCCGTCTTCCCACTTATTCAGAGTCCAATTGATACTGCTACACAATTCGCTCAAGCTTACGAAGTTAATCCGGACAGACGGGAAACTAGTTTTGGTCAAAAGCATTTACCAAAATACATTTTGCCTGATGAGTCTGATCAGGATCATGTAGTTAACGAAGAAAGTGAAATGCGTGAAAACACAGAAGAAATCAATGCATTGCTTTATTCCGATGATGATGATGAGGATGATGATGAAGACGACGAGGTAACAAGTACAGACCATTCTCCATTGAGTAATGAAATGACTTATTTCATACAAAAACCATTCGAGGGCATAAAGGAGGATGTCGCTAGCTCTGATTGGCCAAGCAAACGGCATAAGCTAATCGACGGTGGGTATGCAAGATTAACTCCGCCTCTGGACAGTGCTAGTTCAGTAAGACTAAACGAACCATCTGAATGTGTCAGCGATGCCGAGTCAAAGTACTCTCGCAGCCAAATGTATTATACCATGAAAACCGAAGAGGATAACAATTCCGCAGATGGTGATATTCAATTGAGAAAGGCTAAAATCCGCGAATCGTTGAAAATTCTCGAGAACTTAACTCCCGGTGCAAAAGGAAAGCATCCGCTGTTAGTCATCGACGAAACTATCGATTACTTAAAGTCTCTAATGTCTCAAACTGGTATGCTTGGGGTAAAATATCACTAA 1035 0.4213 MVKGHESWPFPEHVAWPSLYLNGASTLPDPSFCSHSGYLNPALGAFPGFTALATPSLQTDQTNEVRGFVQDLKTEPCLKERNHYGAMQSTNPASLQKKFIIFDRSGNKTRLFYSPVFPLIQSPIDTATQFAQAYEVNPDRRETSFGQKHLPKYILPDESDQDHVVNEESEMRENTEEINALLYSDDDDEDDDEDDEVTSTDHSPLSNEMTYFIQKPFEGIKEDVASSDWPSKRHKLIDGGYARLTPPLDSASSVRLNEPSECVSDAESKYSRSQMYYTMKTEEDNNSADGDIQLRKAKIRESLKILENLTPGAKGKHPLLVIDETIDYLKSLMSQTGMLGVKYH 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08574 344 PANTHER TRANSCRIPTION FACTOR BHLH145 8 342 IPR037546 -
Vivi1g08574 344 MobiDBLite consensus disorder prediction 184 205 - -
Vivi1g08574 344 MobiDBLite consensus disorder prediction 184 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08574 Vivi-Chr1 245868848 245871380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08574 77 332 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09460 37.218 9.71e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08574 - - gmx:100778385 391.349