Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08513 ATGGAAACGTGGTTCATCGCACTCCTCTCTCTCTGCATCATCTTCCTCATCAGAGCCACCGTCTCCACCCTCACCACCACCAAAACCGCCACCCTCCCTCCCGGTCCACTCCACATCCCCCTCCTCACCAGCCTCCTATGGCTCCGAAAATCCTTCTCCCAGCTCGAACCTTATCTCAAAACCCTCCACAACAAACACGGTCCCATCATCGCTCTCAGAATCGGTTCTCGACCTTCCGTTTTCATCTCCGACCGTTCCCTCGCCCACCATGCTCTCGTTCATAACTCCTCCGTTTTCTCCGATCGTCCCAGAGCTCTCCCTACCGGAAAACTTATGTCCAGTAACCAGCATAATATCAGTTCCGCTTCTTATGGTTCCACCTGGAGGACCCTCCGTCGTAACCTCGCCTCCGAGATGCTTCATCCTGCGAAAATCAAATCCTTCTCGGAAATCCGGAACTGGGTACTTTACACTCTCATCAACCGTCTCAAAACTGCTTCAGAGTCTGAAACTGAAACTGAATCCTTTACGGTTGTTCCTCACTTTCATTACGCTATGTTTTGTTTACTTGTTTTCATGTGTTTTGGTGAAAGAGTTAGCGATGAGAAAGTTAACGAGATTGAACGTGTGCAAAGGACGCTTCTGTTGAGTATGAGTAGATTCAATATACTGAATTTCTGGCCTCAGGTTACTAAGATTTTGATGAGGAAAAGATGGGAGGAGTTGTTGAAGTTGCGTAAGGATCAAGAAGATGTTCTTCTTCCGTTGATAAGAGCGAGGAAGAAAAGTAAGGAAAGTAAGAGTGTTGTTTCTTATGCGGATACTCTATTGGAGTTGGAGTTGAAGGAGGAGAATCGTAAACTGAATGAAGATGAAATGGTTAGTCTTTGTTCGGAGTTTTTGAACGGTGGGACGGATACTACTGCGACTGCTTTGCAGTGGATTATGGCGAATTTGGTGAAGTATCCGGACGTGCAGAGGAAGCTTGTGGAGGAGATTAGAGAGGTGATTGGTGGTGGTGATGGTATTGGATTGAAGACGGAAGTGAAAGAGGAAGATTTGCAGAAACTTCCTTATTTGAAGTGTGTGGTTTTGGAAGGGTTGAGGCGTCATCCGCCCGGGCATTTTGTGTTGCCGCACGCGGTGAAGGAGGATGTGGTTTTGAATGGCTATTTGGTGCCTAAAGATGGGACGGTGAATTTTATGGTGGCGGAGATGGGGTGGGATCCTCTCGTTTGGGAGGATCCGATGGAGTTTAAGCCGGAGAGGTTTTTGAAAGATGAATCGTTTGATATTACGGGGAGTAAAGAGATAAAGATGATGCCGTTCGGAGCTGGGAGGAGAATTTGTCCTGGATATCATTTAGCTTTGCTTCATTTGGAATATTTTGTTGCTAATTTGGTTTGGAATTTTGATTGGAAGGTTCCTAAGGGGGGAGATGTGGATTTGTCAGAAAAACAGGAGTTTACTATGGTCATGAAAAATCCATTACAGGTTCATCTTTCTCCTAGGATCTAG 1518 0.4605 METWFIALLSLCIIFLIRATVSTLTTTKTATLPPGPLHIPLLTSLLWLRKSFSQLEPYLKTLHNKHGPIIALRIGSRPSVFISDRSLAHHALVHNSSVFSDRPRALPTGKLMSSNQHNISSASYGSTWRTLRRNLASEMLHPAKIKSFSEIRNWVLYTLINRLKTASESETETESFTVVPHFHYAMFCLLVFMCFGERVSDEKVNEIERVQRTLLLSMSRFNILNFWPQVTKILMRKRWEELLKLRKDQEDVLLPLIRARKKSKESKSVVSYADTLLELELKEENRKLNEDEMVSLCSEFLNGGTDTTATALQWIMANLVKYPDVQRKLVEEIREVIGGGDGIGLKTEVKEEDLQKLPYLKCVVLEGLRRHPPGHFVLPHAVKEDVVLNGYLVPKDGTVNFMVAEMGWDPLVWEDPMEFKPERFLKDESFDITGSKEIKMMPFGAGRRICPGYHLALLHLEYFVANLVWNFDWKVPKGGDVDLSEKQEFTMVMKNPLQVHLSPRI 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08513 505 CDD CYP77_89 65 498 - -
Vivi1g08513 505 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g08513 505 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g08513 505 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g08513 505 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g08513 505 Pfam Cytochrome P450 33 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g08513 505 Gene3D Cytochrome P450 25 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g08513 505 FunFam Cytochrome P450 family protein 26 505 - -
Vivi1g08513 505 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g08513 505 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g08513 505 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g08513 505 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g08513 505 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g08513 505 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g08513 505 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g08513 505 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g08513 505 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 12 497 - -
Vivi1g08513 505 SUPERFAMILY Cytochrome P450 33 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g08513 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08513 Vivi-Chr1 243553672 243555361 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08513 1 504 Cytochrome P450 AT1G64940 57.225 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08513 K24184 - gmx:100792037 714.146