Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08510 ATGCAAAGGAAAAGGCAGCTTTTCCCCTGCAGATGCTTCGCTATTTGTTCGCGTTCTTTAGTTTTTTTTTGTGAATCACTAGAGACGATTGGATCCTTGAAGGTGAAGCTGTTCTCAATCATGAATGATTTCGTGAAGTTCCTCTACCTAAGAGCAAAGAATTCATGCTTACATTTTCTACAGAACATAATTAGTGCAGATCAAGACAATCAGCTTCGACGAGAAGTCGAAATACAGAATCATCTTCGACACCCACGTATCTTGCGACTCTATGGATACTTTTATGATCAGAAACGAGTTTATTTGATTTTAGAGTATGCACCCAAAGGTGAACTTTACATGGCAATATGTCGTGTCATTGGCCCGAGCCCTTATATATTGCCAAGGAAAGCATGTAATTCATATGGACATTAA 414 0.3889 MQRKRQLFPCRCFAICSRSLVFFCESLETIGSLKVKLFSIMNDFVKFLYLRAKNSCLHFLQNIISADQDNQLRREVEIQNHLRHPRILRLYGYFYDQKRVYLILEYAPKGELYMAICRVIGPSPYILPRKACNSYGH 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08510 137 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 63 113 IPR030616 GO:0004672
Vivi1g08510 137 ProSiteProfiles Protein kinase domain profile. 1 137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g08510 137 Pfam Protein kinase domain 66 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g08510 137 Gene3D Phosphorylase Kinase; domain 1 46 110 - -
Vivi1g08510 137 FunFam Aurora kinase A 56 110 - -
Vivi1g08510 137 SUPERFAMILY Protein kinase-like (PK-like) 65 120 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08510 Vivi-Chr1 243507241 243511500 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08510 63 118 CBL-interacting serine-threonine protein kinases AT4G24400 39.286 1.61e-08 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Vivi1g08510 Pkinase 5.7e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08510 K08850 K11481 vvo:131645045 285.804