Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08509 ATGCAAAGGAAAAGGCAGCTTTTCCCCTGCAGATGCTTCGCTATTTGTTCGCGTTCTTTAGTTTTTTTTTGTGAATCACTAGAGACGATTGGATCCTTGAAGGTGAAGCTGTTCTCAATCATGAATGATTTCGTGAAGTTCCTCTACCTAAGAGCAAAGAATTCATGCTTACATTTTCTACAGAACATAATTAGTGCAGACAATCAGCTTCGACGAGAAGTCGAAATACAGAATCATCTTCGACACCCACGTATCTTGCGACTCTATGGATACTTTTATGATCAGAAACGAGTTTATTTGATTTTAGAGTATGCACCCAAAGGTGAACTTTACATGGCAATATGTCGTGTCATTGGCCCGAGCCCTTATATATTGCCAAGGAAAGCATGTAATTCATATGGACATTAA 408 0.3897 MQRKRQLFPCRCFAICSRSLVFFCESLETIGSLKVKLFSIMNDFVKFLYLRAKNSCLHFLQNIISADNQLRREVEIQNHLRHPRILRLYGYFYDQKRVYLILEYAPKGELYMAICRVIGPSPYILPRKACNSYGH 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08509 135 Pfam Protein kinase domain 67 114 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g08509 135 Gene3D Phosphorylase Kinase; domain 1 44 108 - -
Vivi1g08509 135 FunFam Aurora kinase A 57 108 - -
Vivi1g08509 135 SUPERFAMILY Protein kinase-like (PK-like) 62 115 IPR011009 -
Vivi1g08509 135 ProSiteProfiles Protein kinase domain profile. 1 135 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g08509 135 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 68 111 IPR030616 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08509 Vivi-Chr1 243507239 243511500 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08509 68 116 CBL-interacting serine-threonine protein kinases AT4G24400 40.816 2.88e-08 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Vivi1g08509 Pkinase 1.2e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08509 K08850 - vvo:131645045 276.559