Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08431 ATGGCACCACCAAAGCGACTCCGCATCACTCCGCTCGACGATCCACCCACCGCCTCCTCCTCCTCCGATGACGACCAACCACCTTCCTCCAAAAAGCCAGAAGATGAAGTAGTCGATGAAGAAGATTCAGAAGAAGAAACTGATCAGAATGAAGAAGATGATGAAGATGAAGAGGAAGGCTCTTCATCCGAAGAAGAACAAGTTCAACCTCCTTCCAAAAACCCTCCACCATCTACCCCAATCTCAAACCCTAAGCCCGACTCCGGTTCTGAATCGGAGTCTGGTGCCGAATCCGGATCAGAATCCAGATCCGAATCTGATTCTGAACAAGAACCTACTCCACCTAACGCCAAAGTCAAGCCTCTCGCATCCAAACCCATGAAAGCCCAACCACAAGCCCAAGCCCAATCTACTCCTGTATCCCAATCTACTCCTGTACCTGCCAGATCTGGAACAAAGCGTGCAAACGAAAACGGTTCCAAACCTGCTAAGAAGAAAACCGCCGCCGGCGGTGGTTCTGAGAACGAGGCGGATGGAGACGGTGACGTGAAGATGACCGGGGAAGACTCAAAGAAGATGAATCCGAGAGTCTTCACTGAAGAAGACGAGATTGCCATTCTGAAAGGTCTTGCTGACTTCATATCCAAAACTGGAAAGGATCCGATGAAGGACCTGGTGGCATTTCATAGTTTTGTGAAGAAATCTATTCACGGGGATGCGACTAGCGAACAGCTGAAGCGGAAGGTTCGTGGTTTGAAGATGAAGTTCAAAGACGGTGGTAGTTTCACTAAAGAGCATGATAAGAAAGCTTTTGAACTTTACAAAAAGGTTTGGGGCAATACTGAAGGCAATAATGGAGGCAATGAAGGTGAAGAAAATGGGAAAGTGAATGAGAAAACTCCGAAGAGTACTAAGAAGGAGGCTCCGGTGAGAAACAATGGTTCTGCTAAGAAAGAAGTAGTTGCCAAGAATGGTGCTGGAAAAGATGAGGGTGGTGTTGATAAAAGCTTGGCTTTGAGTGAAATGTGTAAATTTGGTGAAGCTGCGGGGTTATCTTTGTTGAACAAGAATGCTGTGGAGAGGGGAATGGGATTGTTGGAGGAGTCTAAGGCTGATGAGTTTGATGAGGGATGGAGAAAGGTTCAAATTGCGGAGATGGAACTGTTTGTGACTCGGGGGCAACTGCTTAAGGATCAGACTAGGATAGCATTGGACGCGTTGAAGAAGTCTGTCTAG 1236 0.4725 MAPPKRLRITPLDDPPTASSSSDDDQPPSSKKPEDEVVDEEDSEEETDQNEEDDEDEEEGSSSEEEQVQPPSKNPPPSTPISNPKPDSGSESESGAESGSESRSESDSEQEPTPPNAKVKPLASKPMKAQPQAQAQSTPVSQSTPVPARSGTKRANENGSKPAKKKTAAGGGSENEADGDGDVKMTGEDSKKMNPRVFTEEDEIAILKGLADFISKTGKDPMKDLVAFHSFVKKSIHGDATSEQLKRKVRGLKMKFKDGGSFTKEHDKKAFELYKKVWGNTEGNNGGNEGEENGKVNEKTPKSTKKEAPVRNNGSAKKEVVAKNGAGKDEGGVDKSLALSEMCKFGEAAGLSLLNKNAVERGMGLLEESKADEFDEGWRKVQIAEMELFVTRGQLLKDQTRIALDALKKSV 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08431 411 Pfam Protein of unknown function, DUF573 195 279 IPR007592 GO:0006355
Vivi1g08431 411 MobiDBLite consensus disorder prediction 129 157 - -
Vivi1g08431 411 MobiDBLite consensus disorder prediction 1 196 - -
Vivi1g08431 411 MobiDBLite consensus disorder prediction 292 306 - -
Vivi1g08431 411 MobiDBLite consensus disorder prediction 279 332 - -
Vivi1g08431 411 MobiDBLite consensus disorder prediction 177 196 - -
Vivi1g08431 411 PANTHER BNAANNG10740D PROTEIN-RELATED 86 406 IPR007592 GO:0006355
Vivi1g08431 411 MobiDBLite consensus disorder prediction 37 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08431 Vivi-Chr1 241515807 241517264 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08431 74 408 GeBP Transcription Factor Family AT4G00390 29.830 9.87e-23 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Vivi1g08431 DUF573 1.1e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08431 - - vvo:131633905 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g08431 1 241515807 241517264 Vivi1g08431 1 241515807 241517264 ECH