Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08418 ATGATGCTGGTCACAAAAAACCATTACCAAACCTTATTTTCTTTTGCATGTTTATTATGTTTCCTATGTTTCTGTTCAGAATTCTCAGGTGCCGCTTCAACTTCCAGAGACAGTATCAAGCATGGTGATTTCATCAGAGACAGAGAAGGTGAAGCTTTAGTCTCCAATGACTTCAACTTCGTGATGGGCTTCTTCGGTTTTCAAAACTCTTCTTCTCGTTACGTTGGTATTTGGTACTACAACATTCCTGGACCCCAAGTCATTTGGGTTGCAAACAGAAACAAACCCATCAATGGCAGCAATGGTTCCTTCACAATGTCAACAAACGGCAACTTAGTTATCCTCGACGAAAATGAAACACAACTCTGGTCTACAAATGTTTCCATTGCTCAGAACAACAAAAACAACTCCGAGGTTGTTCTTCAAGATGATGGTAACCTTGTTCTTTCAAATGGGAAAGTGGTGTTATGGGAAAGCTTTGAAAATCCAAGTGATACTTATGTACCTGGGATGAATGTTCATGTGAATAGCAAGAGCTTTTTCTTGACTTCATGGAAATCAAGTACAGATCCTTCATTAGGGAACCATACAATGGGAATTGATCCAGCAGGGTTACCACCACAGATAGTTGTTTGGGAAGGAGAGAAGAGAAAATGGAGAAGTGGTTATTGGGATGGTAGAATTTTTACTGGTGTAGATATGACAGCTAGTTTTCTTCATGGTTTTGTTCTTAATTGGGATACTAATAATGGAGATAGGTATTTTGTTTATAATAAGGAGTTGTTGTTGAATGATCCTAGTTATGTGAGGTTTCAAATTGGTTCGGATGGTTACGAAAGAGAGTTTATTTGGAACCAAAATGAGAAAAATTGGACTGAGATACAAAAAGGGCCTCATAATGAGTGTGAGATTTATAACTTCTGTGGTGATTTTGCAGTTTGTGATTTGTCGGTTTCGGGTTTGGCTGAATGTAGTTGCTTAAAAGGGTTTGAACGGAGTTGGTCAGGTGGATGTAGGAGGACGACAGCATTGAAGGGTGATATGAGGAATGATAGTTTGGGAGAAGATGGTTTTTTGAAGCTTAGGTGTATGAAGTTACCCGATTTCGCGATTGTGGTAGATACTACGGATTGTGAAGGTGATTGTTTGAAGAATGGTTCTTGTACTGCTTATGCAGAAGTTATTGGAATTGGTTGCATGGCTTGGTATGGAGAGTTGGTAGATCTTCAAAAATTTAGACATGGAGGGAGTACATTGCGCATTCGTCTCGCTCGTTCGGAATTAGGCGACGAAAGGAAAATCAAGAAGATTGTGATTGTGATAATATCGGTTGTTCTCGCAGGGTTATTCTGTCTAGGAATGTTTGTATGGTTGGTATGGAGGAACAAGAGAAAACTCAAAGTTTCTACTGCTTCGCGTCGCAAAAATAGAAGTGTAATACCAATGTTTGATGCAAGAAAGAGCAGAGATGTGTCTGCAGAATTTTCAGGATCAGGTGAAAATAGTTTGGAAGGTAATCAACTAAGCAAAACTGAGCTTCCATTTTACAATTTTAGTTGCATGTCAGCAGCAACCAACAATTTTTCGGAACAAAATAAGCTCGGAGAAGGCGGTTTCGGTCCTGTCTACAAGGGAAAACTTCCGACTGGAGAAGAAATAGCTGTCAAGAGGCTTTCGAGACGGTCGAGCCAAGGTTTAGAGGAGTTCAAAAATGAAATGATGTTGATTGCAAAATTACAACATAGAAATTTGGTTAGACTAATGGGATATTCTATTGAAGGGGAAGAAAAGTTGCTTGTATATGAATTCATGCCAAATAAAAGCTTGGATTGCTTTTTATTCGATCCTATTAAGCAAGCACAATTAGATTGGGCGAGATGGTTTGAAATCATTGAAGGAATTGCAAGAGGACTACTTTATCTGCATCGTGATTCAAGACTTAGAATTATTCATCGTGATCTAAAAGCAAGTAACATTTTGTTAGACAAAAATATGAACCCAAAAATATCAGATTTTGGCTTAGCCCGAATATTCGGTGGAAATCAGAATGAAGCCAATACAACTAGAGTGGTTGGTACATATGGTTATATGTCTCCTGAATACGCTATGGAAGGCCTATTTTCAGTTAAATCAGATGTATATAGTTTTGGAGTATTGCTACTAGAGATTGTGAGTGGCCGCAAAAACACTAGCTTTCGTCATTCAGATGATTCGAGTCTCATAGGATATGCATGGCATCTATGGAACGAACGGAGAGCCTTGGAACTTGTTGATGGTTGCATTCGCGATTCTAGTCCTGAAAACAAAGCATTGAGATGCATACACATAGGGATGTTATGTGTACAAGATTCAGCAGTTCTTAGACCAAACATGTCCAATGTTGTGTTGATGCTTGAGAGTGAAGCAACAACTCTTCCTTTACTTGTTCCGCCTTTGGTTACTTCCATGAAGAGATCCGAGGACAGAGAATTTTATATGGGTGGTCTTGATGTTTCAAATGATCTCACAGTCACAATGCTAGTAGGGAGATAG 2532 0.3902 MMLVTKNHYQTLFSFACLLCFLCFCSEFSGAASTSRDSIKHGDFIRDREGEALVSNDFNFVMGFFGFQNSSSRYVGIWYYNIPGPQVIWVANRNKPINGSNGSFTMSTNGNLVILDENETQLWSTNVSIAQNNKNNSEVVLQDDGNLVLSNGKVVLWESFENPSDTYVPGMNVHVNSKSFFLTSWKSSTDPSLGNHTMGIDPAGLPPQIVVWEGEKRKWRSGYWDGRIFTGVDMTASFLHGFVLNWDTNNGDRYFVYNKELLLNDPSYVRFQIGSDGYEREFIWNQNEKNWTEIQKGPHNECEIYNFCGDFAVCDLSVSGLAECSCLKGFERSWSGGCRRTTALKGDMRNDSLGEDGFLKLRCMKLPDFAIVVDTTDCEGDCLKNGSCTAYAEVIGIGCMAWYGELVDLQKFRHGGSTLRIRLARSELGDERKIKKIVIVIISVVLAGLFCLGMFVWLVWRNKRKLKVSTASRRKNRSVIPMFDARKSRDVSAEFSGSGENSLEGNQLSKTELPFYNFSCMSAATNNFSEQNKLGEGGFGPVYKGKLPTGEEIAVKRLSRRSSQGLEEFKNEMMLIAKLQHRNLVRLMGYSIEGEEKLLVYEFMPNKSLDCFLFDPIKQAQLDWARWFEIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDKNMNPKISDFGLARIFGGNQNEANTTRVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEIVSGRKNTSFRHSDDSSLIGYAWHLWNERRALELVDGCIRDSSPENKALRCIHIGMLCVQDSAVLRPNMSNVVLMLESEATTLPLLVPPLVTSMKRSEDREFYMGGLDVSNDLTVTMLVGR 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08418 843 SUPERFAMILY alpha-D-mannose-specific plant lectins 87 191 IPR036426 -
Vivi1g08418 843 PIRSF SRK 7 843 IPR024171 GO:0004674
Vivi1g08418 843 Gene3D Transferase(Phosphotransferase) domain 1 604 805 - -
Vivi1g08418 843 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 17 789 - -
Vivi1g08418 843 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 31 160 - -
Vivi1g08418 843 CDD PAN_AP_plant 355 424 - -
Vivi1g08418 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 649 661 IPR008271 GO:0004672|GO:0006468
Vivi1g08418 843 CDD B_lectin 50 163 IPR001480 -
Vivi1g08418 843 Pfam S-locus glycoprotein domain 219 332 IPR000858 GO:0048544
Vivi1g08418 843 CDD STKc_IRAK 534 799 - -
Vivi1g08418 843 SMART blect_4 44 163 IPR001480 -
Vivi1g08418 843 Pfam PAN-like domain 354 409 IPR003609 -
Vivi1g08418 843 Pfam D-mannose binding lectin 87 186 IPR001480 -
Vivi1g08418 843 Gene3D - 31 160 IPR036426 -
Vivi1g08418 843 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 604 806 - -
Vivi1g08418 843 Gene3D Phosphorylase Kinase; domain 1 492 603 - -
Vivi1g08418 843 Pfam Protein tyrosine and serine/threonine kinase 531 796 IPR001245 GO:0004672|GO:0006468
Vivi1g08418 843 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 493 603 - -
Vivi1g08418 843 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Vivi1g08418 843 SUPERFAMILY Protein kinase-like (PK-like) 514 821 IPR011009 -
Vivi1g08418 843 ProSiteProfiles Protein kinase domain profile. 528 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g08418 843 ProSiteProfiles Bulb-type lectin domain profile. 36 162 IPR001480 -
Vivi1g08418 843 SMART serkin_6 528 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08418 Vivi-Chr1 240969096 240977305 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08418 426 821 Receptor kinase-like Gene Family AT4G05200 53.117 2.47e-131 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi1g08418 PK_Tyr_Ser-Thr 5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08418 - - mtr:25491984 1151.73