Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08414 ATGATGCTGGTCACAAAAAACCATTACCAAACCTTATTTTCTTTTGCATGTTTATCATGTTTCCTATGTTTCTGTTCAGAATTCTCATGTGCCGCTTCAACTTCCAGAGACAGTATCAAGCATGGTGATTTCATCAGAGACAGAGAAGGTGAAGTTTTAGTTTCCAATGGCTTCAACTTCGTGATGGGTTTCTTCGGTTTCCAAAACTCTTCTTCTCGTTACGTTGGTATTTGGTACTACAACATTCCTGGACCCCAAGTCATTTGGGTTGCAAACAGAAACAAACCCATCAATGGCAGCAATGGTTCCTTCACAATATCAACAAACGGCAATTTAGTTATCCTCGACGAAAATGAAAAACATGTCTGGTCTACAAATGTTTCCATTGCTCACAACAACAAAAACAACTCCGAGGTTGTTCTTAGAGATGATGGTGACCTTGTTCTTTCAAATGAGAAAATGGTGTTATGGGAAAGCTTTGAAAATCCAAGTGATACTTATCTACCTGGGATGAAAATTCATGTGAATGGGAAGAAGAAGAAGAAGAAGAGGAAGAGCGTTTTCTTGACTTCATGGAAATCAAGTACGGATCCTTCATTAGGGAACCATACAATGGGAATTGATCCTGAAGGGTTGCCACCACAAATAGTAATTTTGGAAGGAGAGAAGAGAAAATGGAGAAGTGGTTATTGGGATGGTAGAATTTTTACTGGTGTAGATATGACAGCTAGTTTTCTTAATGGTTTTGTTCTTAATTTGGATACTAATAATGGAGATAGGTATTTTGTTTATAATAAAGAGTTGTTGAATCATCCTAGTTCTGTGAGGTTTCAGATTGGTTCGGATGGTTACGAAAGAGAGTTAATTTGGGACAAAAATGAGAAAAATTGGACTGAGATACAAAAAGGGCCTAATAATGAGTGTGAGATTTATAACTTTTGTGGTGATTTTGCAGTTTGTGATTTGTCGGTTTCGGGTTTGGCTGAATGTCGTTGCTTAAAAGGGTTTGAACTAAAGGATAGAGGGGATTTAACAGGTGGATGTAGGAGGATGACAGCATTGAAGGGTGATATGAGGAATGGTAGTTTGGGAGAAGATGGTTTTTGGAAGCTTAGGTGTATGAAGTTACCCGATTTCGCGAATGTGGTAGATACTTCGGATTGTGAAGGGAATTGTTTGAAGAATGGTTCTTGTACTGCTTATGCAGAAGTTATGGGAATTGGTTGCATGGCTTGGTATGGAGAGTTGGTAGATCTTCAAAAGTTTGAACATGGAGGGAATACATTGCGTGTTCGTCTTGCTCGTTCGGATTTAGGCGACGAAAGTAAAATCAAGAAGATTGTGATAATATCGGTTGTTCTCGCAGGGTTAATCTGTCTAGGAATGTTTGTATGGTTGGTATGGAGGAACAAGAGAAAACTCAAAGTTTCTACTACTTCGCGTCGCAAAAATAGTGATGTAATACCAATGTTTGATGCAAGAAAGAGCAGAGAGGTGTCTGCAGAATTTTCAGGATCAGGTGAACATAGTTTGGAAGGTAATCAACTAAGCAAGACTGAGCTTCCATTTTACAATTTTAGTTGCATGTCAGCAGCAACCAACAATTTTTCGGAACAAAATAAGCTCGGAGAAGGCGGTTTCGGTCCTGTCTACAAGGGAAAGCTTCCGACCGGAGAAGAAATAGCTGTCAAGAGGCTTTCGAGGCGGTCGAGCCAAGGTTTAGAGGAGTTCAAGAATGAAATGATGTTGATAGCAAAATTACAACATAGAAATTTGGTTAGACTAATGGGATGTTCTATTGAAGGGGAAGAAAAGTTGCTTGTATATGAATTCATGCCAAACAAAAGCTTGGATTGCTTTTTATTCGATCCTATTAAGCAAGCACAATTAGATTGGGCGATACGTTTTGAAATCATTGAAGGAATCGCTAGAGGACTACTCTATTTGCATCGCGATTCAAGACTTAGAATTATTCATCGTGATCTAAAAGCAAGTAACATTTTGTTAGACGAGAATATGAACCCAAAAATATCTGACTTTGGCTTGGCTCGCATATTCGGTGGAAATCAAAATGAAGCCAATACAACCAGAGTGGTTGGTACATATGGTTATATGTCTCCTGAATACGCTATGGAAGGCCTATTTTCAGTCAAATCAGATGTATATAGTTTTGGTGTATTGCTACTAGAGATTGTGAGTGGCCGCAAAAACACTAGCTTTCGTCATTCAGATGATTCGAGTCTCATAGGTTATGCATGGCATCTATGGAACGAACGGAGAGCAATAGAACTTGTTGATGGTTGCATTCGCGATTCTAGTCCTGAAAACAAAGCATTGAGATGCATACACATAGGGATGCTATGTGTACAAGATTCAGCAGGTCTTAGACCAAACATGTCCAATGTTGTGTTGATGCTTGAGAGTGAAGCAACAACTCTTCCTTTACCTGTGCAACCTTTGATTACTTCCATGAGGAGATCTGACGACAGAGAATTATACATGGATGGTCTTGATGTTTCAAATGATCTCACAGTCACAATGCTAGTAGGGAGATAG 2556 0.3912 MMLVTKNHYQTLFSFACLSCFLCFCSEFSCAASTSRDSIKHGDFIRDREGEVLVSNGFNFVMGFFGFQNSSSRYVGIWYYNIPGPQVIWVANRNKPINGSNGSFTISTNGNLVILDENEKHVWSTNVSIAHNNKNNSEVVLRDDGDLVLSNEKMVLWESFENPSDTYLPGMKIHVNGKKKKKKRKSVFLTSWKSSTDPSLGNHTMGIDPEGLPPQIVILEGEKRKWRSGYWDGRIFTGVDMTASFLNGFVLNLDTNNGDRYFVYNKELLNHPSSVRFQIGSDGYERELIWDKNEKNWTEIQKGPNNECEIYNFCGDFAVCDLSVSGLAECRCLKGFELKDRGDLTGGCRRMTALKGDMRNGSLGEDGFWKLRCMKLPDFANVVDTSDCEGNCLKNGSCTAYAEVMGIGCMAWYGELVDLQKFEHGGNTLRVRLARSDLGDESKIKKIVIISVVLAGLICLGMFVWLVWRNKRKLKVSTTSRRKNSDVIPMFDARKSREVSAEFSGSGEHSLEGNQLSKTELPFYNFSCMSAATNNFSEQNKLGEGGFGPVYKGKLPTGEEIAVKRLSRRSSQGLEEFKNEMMLIAKLQHRNLVRLMGCSIEGEEKLLVYEFMPNKSLDCFLFDPIKQAQLDWAIRFEIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDENMNPKISDFGLARIFGGNQNEANTTRVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEIVSGRKNTSFRHSDDSSLIGYAWHLWNERRAIELVDGCIRDSSPENKALRCIHIGMLCVQDSAGLRPNMSNVVLMLESEATTLPLPVQPLITSMRRSDDRELYMDGLDVSNDLTVTMLVGR 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08414 851 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 21 797 - -
Vivi1g08414 851 ProSiteProfiles Protein kinase domain profile. 536 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g08414 851 Gene3D Phosphorylase Kinase; domain 1 499 611 - -
Vivi1g08414 851 ProSiteProfiles Bulb-type lectin domain profile. 36 162 IPR001480 -
Vivi1g08414 851 CDD B_lectin 50 163 IPR001480 -
Vivi1g08414 851 CDD PAN_AP_plant 365 434 - -
Vivi1g08414 851 ProSiteProfiles PAN/Apple domain profile. 348 434 IPR003609 -
Vivi1g08414 851 Pfam Protein tyrosine and serine/threonine kinase 539 804 IPR001245 GO:0004672|GO:0006468
Vivi1g08414 851 Gene3D - 31 160 IPR036426 -
Vivi1g08414 851 SMART serkin_6 536 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g08414 851 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 612 814 - -
Vivi1g08414 851 Pfam D-mannose binding lectin 87 193 IPR001480 -
Vivi1g08414 851 SUPERFAMILY Protein kinase-like (PK-like) 522 834 IPR011009 -
Vivi1g08414 851 ProSitePatterns Serine/Threonine protein kinases active-site signature. 657 669 IPR008271 GO:0004672|GO:0006468
Vivi1g08414 851 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Vivi1g08414 851 SUPERFAMILY alpha-D-mannose-specific plant lectins 87 198 IPR036426 -
Vivi1g08414 851 Pfam S-locus glycoprotein domain 226 339 IPR000858 GO:0048544
Vivi1g08414 851 SMART blect_4 44 163 IPR001480 -
Vivi1g08414 851 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 31 160 - -
Vivi1g08414 851 CDD STKc_IRAK 542 807 - -
Vivi1g08414 851 PIRSF SRK 7 851 IPR024171 GO:0004674
Vivi1g08414 851 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 501 611 - -
Vivi1g08414 851 Gene3D Transferase(Phosphotransferase) domain 1 612 813 - -
Vivi1g08414 851 Pfam PAN-like domain 364 419 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08414 Vivi-Chr1 240891604 240894966 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08414 494 829 Receptor kinase-like Gene Family AT4G05200 57.817 3.12e-129 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi1g08414 PK_Tyr_Ser-Thr 2.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08414 - - gmx:102660295 1171.38