Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08413 ATGCGAGGAGGTTTCTTCTTCTTCCTCTTCTTCTTGTTCATCACAATCTCAACCTCTACAGTCACAGACACGTTAACCTCAACACAAATTCTCAGAACAAATCACACCCTTGAATCTCTTCAAGGATCATTCGTTCTTGGTTTCATCTCACGAACATCTTCCAACATTTATTTAGCCATACGGTACAAAAACATCCCAGACACTGTTGTTTGGGTTGCAAATAGAGACAACCCTCTTCAAAATTCAACCGACAGCTTCCTCAAAATCACTAACGATGGAAACATAGCACTTCTCAATTCATCGACAGCTTCAAACAACCTCGTTTGGTCTTCGAATTCTTTGAATCAAACAAATGCTAAAAACCAGGTTCTTGTTCTTCAGCTATTAGATACTGGAAATTTAGTTCTCAGAGAAATAAACGTGAATGATCCAACAAAATATCTATGGCAAAGCTTCGATCACCCGACAGATACTTTGTTACCAAACATGACCATGGGTTGGAATTTCGACAAAAAAACTGAAAAGCACTTAACTTCATGGAAGATCACAGGTGAAGATCCTTCCTCAGGTGATTATTCACTCAAAGTTGATTATCATGGTCTACCAGAATTTTTCCTGCGGAATGATGATAGGGATACTATAATATTCCGAACTGGACCTTGGAATGGTGAAAGATTCAGCGGTGTACCAGATATGCAACGTGAGATAGATTCAATAGTTTTCAGTTTCTCATTGAACGAACACGGTGTGAACTACTCGTTTTCGATTAGGAATAAATCGATTTTTTCGAGACTTGTAGTGAATTCTGATGGTCAACTTCAACGTCTAACTTGGGTTCAGAGTAGCAAAACATGGACAAAGTTTTGGTACGCGCCGAGAGATCCATGTGATAATTACAAAGAATGTGGTCCTTACGGTGTATGTGATTCCAACGCTTCGCCGGTTTGTGAATGCATGAAAGGGTTTAGTCCTAAGAATGAACAAGCTTGGAAATTGAGAGATGGGTCTGATGGATGTGTGAGGAACACGAAATTGGATTGTAAGAGTGATAAGTTTTATCATATGGAGAAAGTGAAGTTGCCTGAGACAACCTCAGTGTTTGTGAACACGACAATGGAAATTGGTGAATGTGGTGAATTGTGTCATGGGAATTGTTCATGTACTGGTTATGCAAATGTTTATATAAGTAATGGAGGAAGTGGTTGTGTTATGTGGATTGGAGAACTCAATGATATAAGAAATTTTTCTGATGGTGGACAAGATCTTTTTGTTAGATTAGCAGCTTCTGAACTACTAGATAACTCAACTTCTACCAGAGGCTCTCACAAGAAAAACCCTAAAGCTGTGATTATAGGAATCACAATTTCTATTGTTGTTATAGTTTTGGGATTGTGTATCCTTTTATGTAAGAGGAAATTGCTAAGTCATAGAATTAGAAATGCAGACGACATGGATGAACTAGACTTGCCAATATTTGATTTTAATACCATAATAATAGCTACAAATAACTTCTTGGAAGCAAATAAACTTGGACATGGAGGCTTTGGTAGTGTTTATAAGGGAAGGTTGGCTGAAGGGCAAGAAATAGCTGTCAAGAGGTTATCAGAAACTTCAGGGCAAGGAAATGAAGAATTTAAGAATGAGGTCAAGTTAATTGCCAAGCTTCAACATCGAAACCTTGTTCGGCTTTTAGGTTGTTGCATTGACAAGGAAGAGAAGCTTCTTGTGTATGAGTATATGGAAAATAGAAGTCTTGATTCAATTTTGTTTGACAAAGCTAGAAAACACTTATTGGATTGGAAAAAACGATTCTACGTTATATGCGGAATCGCTAGAGGGCTTCATTACTTGCATCACGATTCAAGGCTGAGAATTATCCATAGGGATATCAAGGCAAGCAACATTCTACTTGACGCCGAAATGAATCCAAAAATATCAGATTTTGGAATGGCTAGAATATTTGCCCATGAGCAAACAGAGGCAAACACTTTACGTGTAGTCGGAACATACGGTTATATGTCTCCTGAATATGCTATGGACGGAAACTTCTCAGTTAAATCAGATGTTTTTAGCTTTGGAGTTATTGTGCTAGAGACCATAAGTGGAAAGAAAAATAAAGGATTTTACTACACAGACGATGATATGAATCTTCTAAAGAATGCATGGGGACAATGGAGAGAAGGAAATGCATTGGAACTCATTGATTCGTCGATTGGCGATTCATATACAAAATCTGAAGTTCTTAGATGCATACATGTTGGGCTATTGTGTGTCCAAGAACGCGCCGAAGATAGGCCAACAATGCCTTTAGTGCTTTTGATGCTTGGAAGTGAAAATGCACTAAAGCCAGAACCTAGAAGTCCGGGGTTTTCTCTTGGAAGATCAAAGAATCCTCCAGAGACTAAGTCGTCTTCAAGTAAGCAAGATGAAACACAGAGTGTGAACCAAGTCACAGTCACATTACTTGATGCTAGGTAG 2478 0.3842 MRGGFFFFLFFLFITISTSTVTDTLTSTQILRTNHTLESLQGSFVLGFISRTSSNIYLAIRYKNIPDTVVWVANRDNPLQNSTDSFLKITNDGNIALLNSSTASNNLVWSSNSLNQTNAKNQVLVLQLLDTGNLVLREINVNDPTKYLWQSFDHPTDTLLPNMTMGWNFDKKTEKHLTSWKITGEDPSSGDYSLKVDYHGLPEFFLRNDDRDTIIFRTGPWNGERFSGVPDMQREIDSIVFSFSLNEHGVNYSFSIRNKSIFSRLVVNSDGQLQRLTWVQSSKTWTKFWYAPRDPCDNYKECGPYGVCDSNASPVCECMKGFSPKNEQAWKLRDGSDGCVRNTKLDCKSDKFYHMEKVKLPETTSVFVNTTMEIGECGELCHGNCSCTGYANVYISNGGSGCVMWIGELNDIRNFSDGGQDLFVRLAASELLDNSTSTRGSHKKNPKAVIIGITISIVVIVLGLCILLCKRKLLSHRIRNADDMDELDLPIFDFNTIIIATNNFLEANKLGHGGFGSVYKGRLAEGQEIAVKRLSETSGQGNEEFKNEVKLIAKLQHRNLVRLLGCCIDKEEKLLVYEYMENRSLDSILFDKARKHLLDWKKRFYVICGIARGLHYLHHDSRLRIIHRDIKASNILLDAEMNPKISDFGMARIFAHEQTEANTLRVVGTYGYMSPEYAMDGNFSVKSDVFSFGVIVLETISGKKNKGFYYTDDDMNLLKNAWGQWREGNALELIDSSIGDSYTKSEVLRCIHVGLLCVQERAEDRPTMPLVLLMLGSENALKPEPRSPGFSLGRSKNPPETKSSSSKQDETQSVNQVTVTLLDAR 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08413 825 ProSiteProfiles Protein kinase domain profile. 504 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g08413 825 ProSiteProfiles PAN/Apple domain profile. 347 427 IPR003609 -
Vivi1g08413 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 580 783 - -
Vivi1g08413 825 CDD B_lectin 28 155 IPR001480 -
Vivi1g08413 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 469 579 - -
Vivi1g08413 825 SMART ntp_6 347 426 IPR003609 -
Vivi1g08413 825 ProSiteProfiles Bulb-type lectin domain profile. 22 149 IPR001480 -
Vivi1g08413 825 ProSitePatterns Protein kinases ATP-binding region signature. 510 532 IPR017441 GO:0005524
Vivi1g08413 825 MobiDBLite consensus disorder prediction 794 825 - -
Vivi1g08413 825 PIRSF SRK 3 825 IPR024171 GO:0004674
Vivi1g08413 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Vivi1g08413 825 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 223 IPR036426 -
Vivi1g08413 825 Pfam D-mannose binding lectin 68 181 IPR001480 -
Vivi1g08413 825 SUPERFAMILY Protein kinase-like (PK-like) 488 775 IPR011009 -
Vivi1g08413 825 Gene3D Transferase(Phosphotransferase) domain 1 580 784 - -
Vivi1g08413 825 Gene3D - 17 153 IPR036426 -
Vivi1g08413 825 Gene3D Phosphorylase Kinase; domain 1 469 579 - -
Vivi1g08413 825 SMART serkin_6 504 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g08413 825 Pfam S-locus glycoprotein domain 216 326 IPR000858 GO:0048544
Vivi1g08413 825 Pfam Protein tyrosine and serine/threonine kinase 508 722 IPR001245 GO:0004672|GO:0006468
Vivi1g08413 825 CDD PAN_AP_plant 343 427 - -
Vivi1g08413 825 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 7 766 - -
Vivi1g08413 825 SMART blect_4 28 155 IPR001480 -
Vivi1g08413 825 CDD STKc_IRAK 510 775 - -
Vivi1g08413 825 Pfam PAN-like domain 347 412 IPR003609 -
Vivi1g08413 825 Pfam Domain of unknown function (DUF3403) 778 825 IPR021820 GO:0004674
Vivi1g08413 825 MobiDBLite consensus disorder prediction 781 825 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08413 Vivi-Chr1 240869724 240873231 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08413 469 792 Receptor kinase-like Gene Family AT4G11530 58.716 1.30e-131 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi1g08413 PK_Tyr_Ser-Thr 2.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08413 - - gmx:100797331 1096.26