Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08322 ATGGGAACTAGGCTTGACGGTGGGCTGGAATTTTCTGTTTGTCCTGCAGAAACCTTGAATGTCAGATGGCAGCTATTCTTGTGTGTATCTGTTGGTCTTTGGGCAGGTCTTATCATTGGATTTGTTACTGAATACTATACCAGTAATGCATACAGCCCTGTGCAAGATGTTGCTGATTCCTGCAGGACTGGTGCTGCTACCAATGTTATCTTTGGCCTTGCCTTGGGATACAAGTTTGTTATCATTCCAATTTTTGCCATTGCAATTAGTATTTTTGTTAGTTTTAGTTTTGCTGCCATGTATGGTGTTGCTGTTGCCGCTCTTGGAATGTTGAGTACCATAGCAACCGGATTAGCCATTGATGCATACGGTCCAATCAGTGACAATGCCGAAGGTATTGCTGAGATGGCTGGAATGAGTCACAGAATTCGTGAAAGAACCGATGCTCTTGATGCTGCAGGAAACACAACTGCTGCCATTGGAAAGGTTCAGTTTTCCACTTTTTTCTTCTTTCTTTTCACCTAG 525 0.4305 MGTRLDGGLEFSVCPAETLNVRWQLFLCVSVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKFVIIPIFAIAISIFVSFSFAAMYGVAVAALGMLSTIATGLAIDAYGPISDNAEGIAEMAGMSHRIRERTDALDAAGNTTAAIGKVQFSTFFFFLFT 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08322 174 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 21 162 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vivi1g08322 174 Pfam Inorganic H+ pyrophosphatase 20 162 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08322 Vivi-Chr1 238370452 238371265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08322 22 162 Primary Pumps ATPases AT1G15690 97.163 1.96e-89 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08322 K23025 - vvo:131597178 304.679