Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08307 ATGGACGTAGACTATGAAGATATAGATTGTGAAGAATTGGTTAGTTGTAATAATGTCGGCGATGAAGAAGGAAAAGAGGACATGGATATTTACAAAAAGATTAATGACCTGACAGATGATGATATAAGAGGTTTGGAATTTGTTTCTGAGGAAAAAGCAATAGATTTCTATGAAATATATGCAAAATGTCACGGGTTTGCAATAAGAAAAGATGATGTAAAACGTGATTATGAAGGGAATATAATTGTTCGTCAATTAGTTTGTAACAGAGAGGGTAAGAGTGATAAGAAGCGGGGACGGTGTAGAGATCCGAGGCCAACGATGCGAATGGAATGTCGTGCGAGGTTTCGAGTAGCTCTAAATCTTGCGACTGAAAAGTGGAGAGTTTCTGTATTTGAGCCCTCTCATAACCATGGGTTAAGTCCAACACATTATGTTCATCTAATTCCTAAGTATCGTCGATTGAGTGAATCAGATAAAGCTCTTGTTGATGGCCTGCATACAGAAGGTGTTAGAACATGTCATATTTTAGGTTTTATGATGGCTCAAAAAGGTGGTCATAAAGGTCTGGGATTTTGTAAAAAGGACTTATATAACTACTTAAATAATGAAGCAATGGCAAGAATAGAAGGAGGGGATGCTTTTGCTGCTTTGAGTTATTTACAGGCTAAAGCTGATAATGATCCAATGTTCTTTTCGAAGTTTACCACAACAGATGAAGGACGTTTAGAAAACTTATTTTGGTCAAATTCAGCTAGTCGGATTGACTATGAATGTTTTGGTGATGTGATTGCTTTTGACGCAACTTATAAGAAGAATAGGTATAACAAGCCTGGAATTTTTCTGTCAATTATTTGCAACAGGAGGTCTGATATACCATAG 882 0.3662 MDVDYEDIDCEELVSCNNVGDEEGKEDMDIYKKINDLTDDDIRGLEFVSEEKAIDFYEIYAKCHGFAIRKDDVKRDYEGNIIVRQLVCNREGKSDKKRGRCRDPRPTMRMECRARFRVALNLATEKWRVSVFEPSHNHGLSPTHYVHLIPKYRRLSESDKALVDGLHTEGVRTCHILGFMMAQKGGHKGLGFCKKDLYNYLNNEAMARIEGGDAFAALSYLQAKADNDPMFFSKFTTTDEGRLENLFWSNSASRIDYECFGDVIAFDATYKKNRYNKPGIFLSIICNRRSDIP 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08307 293 Pfam FAR1 DNA-binding domain 55 141 IPR004330 -
Vivi1g08307 293 PANTHER OS01G0519700 PROTEIN 42 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08307 Vivi-Chr1 238064607 238065571 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi1g08307 FAR1 1.5e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08307 - - vvo:131595359 542.347