Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08164 ATGGAGGAAAATACTAGTTCGTGGTTACAACGGGCGAAGTATTCTCATACGGTGTGTCATCGATTGGATACGTCGAGGATGAAACCGACTCCGTTCAACGATCAACTAGAACAGGAACAAAATTCGAGGTTTTCTTCGTATGTTAAGCGGAATCTTTTAACCAACAAGCAGAGATCTTTGTCGCCGTTGCCGAAGAATTTTATTTCCGATGTGTTTAGAGAAGCCAAACATGAGCAGAAGAGGTTCTCGACGCCGGGTCCGAGGAGGGACAAGAGGATTATGGGAAAGGTGTCGTTGAGCCAGGAATTACCCAGGGTGTCGAGTTCGAAATCGCCTTTTTCGAGTCCGAACAAGCAAAAGATGCCAAAGGGGCTTACGAAGGATTCTTCGTGGGCTAAGCTTTTTGAAAGCGGCGGCGGTGGAAAGGTTACTGCTTTGGAAACGGCGGAGGAATGGACTATTGACATGTCGAAGCTGTTTCTTGGACATAAGTTCGCTCATGGCGCTCATAGTAGGCTTTATCATGGTGTATATAAAGAGGAGATTGTAGCTGTTAAAATGATTAGGGTACCTGATGATGACGATAACGGAGAATTGGCTTCTCGATTAGAGGATCAGTTTGTTAGAGAAGTCACTCTCTTATCTCGCCTTCATCATCGAAATGTCATAAAGTTCATAGCTGCGAGCAGCAATCCCCCGGTTTATTGTATTATCACAGACTATATATCCGAAGGCTCGTTGAGGGCTTATTTGCATAAGCTGGAGCGCAAAACTATTTCTCACGAAAAGTTAATCACTTTCGCTCTGGATATCGCTCGTGGGATGCAATATATACACTCTCAAGGTGTCATTCATAGGGATCTTAAACCAGAGAACATCCTTATTGGTGAAGACTCTCGTCTTATACTTGCTGATTTCGGCATTGCCTGTGAAGAGGCCGTATGCGACCTATTGGCTGATGATCCTGGAACATATCGTTGGATGGCACCTGAAATGATCAAACGAAAATCCTACGGGAGAAAGGTTGATGTGTATAGTTTTGGGCTTATCTTATGGGAATTGTTGACCGGAACAATTCCGTACGAGGATATGAATCCAATCCAGGCTGCTTTTGCTGTTGTGAATAAGAAATTAAGGCCGATTATTCCTCCAAGCTGCCCACCTGCAATGCGAGCATTAATCGAGCAATGCTGGTCGCTGCAACCCGACAAGAGGCCTGATTTCTGGCAGATTGTCAAGGTATTAGAGCAATTTCAATCATCTCTCGCACGTGACGGAACCCTGACGCTGGTGCAGAGTCCTCGTTGCCAAGATCAAAAGAAAGGGCTTCGCCATTTGATGCAAAAGCTTGGTCCGGTTAATCAAAATAGCTACAGCGGCCCTAAGCCTAAGCCGAAATTCACATGA 1407 0.452 MEENTSSWLQRAKYSHTVCHRLDTSRMKPTPFNDQLEQEQNSRFSSYVKRNLLTNKQRSLSPLPKNFISDVFREAKHEQKRFSTPGPRRDKRIMGKVSLSQELPRVSSSKSPFSSPNKQKMPKGLTKDSSWAKLFESGGGGKVTALETAEEWTIDMSKLFLGHKFAHGAHSRLYHGVYKEEIVAVKMIRVPDDDDNGELASRLEDQFVREVTLLSRLHHRNVIKFIAASSNPPVYCIITDYISEGSLRAYLHKLERKTISHEKLITFALDIARGMQYIHSQGVIHRDLKPENILIGEDSRLILADFGIACEEAVCDLLADDPGTYRWMAPEMIKRKSYGRKVDVYSFGLILWELLTGTIPYEDMNPIQAAFAVVNKKLRPIIPPSCPPAMRALIEQCWSLQPDKRPDFWQIVKVLEQFQSSLARDGTLTLVQSPRCQDQKKGLRHLMQKLGPVNQNSYSGPKPKPKFT 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08164 468 ProSiteProfiles Protein kinase domain profile. 159 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g08164 468 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 107 422 - -
Vivi1g08164 468 Gene3D Transferase(Phosphotransferase) domain 1 244 455 - -
Vivi1g08164 468 Pfam Protein tyrosine and serine/threonine kinase 161 415 IPR001245 GO:0004672|GO:0006468
Vivi1g08164 468 FunFam Kinase suppressor of Ras 1 148 242 - -
Vivi1g08164 468 Gene3D Phosphorylase Kinase; domain 1 147 243 - -
Vivi1g08164 468 PRINTS Tyrosine kinase catalytic domain signature 386 408 IPR001245 GO:0004672|GO:0006468
Vivi1g08164 468 PRINTS Tyrosine kinase catalytic domain signature 342 364 IPR001245 GO:0004672|GO:0006468
Vivi1g08164 468 PRINTS Tyrosine kinase catalytic domain signature 277 295 IPR001245 GO:0004672|GO:0006468
Vivi1g08164 468 PRINTS Tyrosine kinase catalytic domain signature 239 252 IPR001245 GO:0004672|GO:0006468
Vivi1g08164 468 PRINTS Tyrosine kinase catalytic domain signature 323 333 IPR001245 GO:0004672|GO:0006468
Vivi1g08164 468 MobiDBLite consensus disorder prediction 78 126 - -
Vivi1g08164 468 SMART serkin_6 159 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g08164 468 MobiDBLite consensus disorder prediction 78 96 - -
Vivi1g08164 468 FunFam serine/threonine-protein kinase HT1 244 437 - -
Vivi1g08164 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 283 295 IPR008271 GO:0004672|GO:0006468
Vivi1g08164 468 MobiDBLite consensus disorder prediction 101 124 - -
Vivi1g08164 468 CDD STKc_MAP3K-like 166 415 - -
Vivi1g08164 468 SUPERFAMILY Protein kinase-like (PK-like) 146 415 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08164 Vivi-Chr1 231751251 231753939 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08164 1 468 MAP Kinase Kinase Kinase AT5G58950 52.941 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Vivi1g08164 PK_Tyr_Ser-Thr 3.1e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08164 - - vvo:131644953 932.554