Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08084 ATGGCGGCCGCTGTTGTTGGTGAAGCTTTTCTCTCTGCTTTCATTGAAGTTCTCCTTGACAGACTTGCTTCTCATCAGGTTCTTGACTTGATCCGTGGGAAGAAACTTGACATCAATTTAGTCCAAAGGTTGAAGAACACTCTTTACGCTGTTGAGGCTGTGCTCAACGATGCTGAACAGAAGCAGATTCATGACTCTGCTGTTAACAAATGGCTTGATGATCTCAAAGATGCTCTCTATGTTGCTGATGACCTTCTTGATCGGATTTCTACTAAAGCTGCAACTACTCAGAAGAACAAAGAGGTCAGTACTGCTAACTACTTTTCTCGCTTTTTCAACTTTGAGGAAAGGGATATGGTTTGTAAGCTGGAGGATATAGTTGCTAGGCTTGAATACATTCTCAATTTCAAAGATATTCTTGGCCTTCAACATATTGCAACTCATCACTCATCATGGAGATCTCCATCAACCTCTTTACAAGACAGATTTACCGTATTTGGTAGGGATCAAGACAAAGAGGCCATACTCAAATTACTGTTAGATGATGATAATCATAAGGATGGAATTTCTGTGATCCCTATAGTTGGTATGGGTGGAGTGGGAAAAACTACTTTAGCTCAATCTGTGTACAACCATGATACTATAAAGCAGAAATTCAATGTTCAAGCATGGGCTTGTGTTTCTGATCATTTTGATGAATTGAATGTTGCAAAGGCCATCTTGGAGTCAATTGTGGGGAATGCTTGTAGCACAGATAACAAAGAGTTGCTTCATCGTGATTTGAAGGAAAAACTAGCTGGAAAAAAGTTCTTAATTGTTTTGGATGATGTATGGACCGAGGATTATGACGGCTGGAATTCTCTTTTAAGGCCTCTTCAATACGGAGCTAAAGGAAGTAAAATTCTTGTAACAACCCGTATCCAAAAAGTTGCTTCTATGGTTCAAACTTTTCAAGATTACTCTCTTGAGAAATTGTCTGATGAAGATTGTTGGTCAGTGTTTGTAAACCATGCATGCCTTTCTCCAGAAGAATTCAGTGAGAATAAGAATCTCCTTAGAATTGGCAAAGAGATTGTTAGAAAATGCAAGGGATTGCCTTTAGCAGCACAATCACTTGGGGGCTTGTTGCGAAGTAAACGTGACATCAAGGATTGGGATAATATACTAAATAGTAACATTTGGGTAAATGAGAGTAAGATCATTCCAGCACTAAGAATTAGTTATCATTATCTCCCTCCTTATTTGAAACGCTGCTTTGTTTATTGTTCCTTGTATCCTAAGGATCATAAATTTTTTAAAGACAAGTTGATTTTATTGTGGATGGCTGAAGATCTTTTACAACCTCAAAAAAACGGGAAGACTTTAGAAGAAGTTGGTTATGGGTATTTTGATGACTTAGTTTCAAGATCGTTTTTTCAACATTCTGGGAATAAGAATCAGAGTTTTGTGATGCATGATCTGGTGCATGATTTAGCGATATTGCTAGGTGGAGATTTCTATTTCAGAACAGAAGAACTCGGGAAAGAAATGAAGATCGGTACCATGACCCGTCATTTATCATTTAGAAGCTTCAGTGGTCAAGTCTTTGAAAGCTTTGATATTTTTGACCGAGCAAAACATCTTAGGACGTTTTTGACAAACTATTTTAAACCCCCTCCTTCCAATATCGAAAAGGCATCATGCATCAATTTATCCACGTTGAAGAGCTTGAGAGTTTTGTCATTTCACAACTCTCCATATCTTGATGCATTGCCCGATTCGATAAATGAACTGATCCATTTGCGTTACTTGGATCTCTCAGCCACGACAATTAAAACATTACCAGAGTCATTGTGTAATTTGTATAATCTACAAACGTTGAGGTTGCACAATTGTCGAGAACTAACCTGGCTTCCCAATGACATGCAAAATCTTGTAAATTTGCGCCATCTTGATATCCGTGGAAATCGTAAGTTAGAAGAAATGCCTGTTGGAATGAGCAAATTAAATCAGTTGCATTATTTAAGTTACTTTGTTGTGGGAAAACATGAAGAGAACGGGATCAAGGAACTGGGGACACTTTCAAATCTTCACGGATCACTTTCCATTAAGAAATTAGAGAATGTTACCAACAGCTTTGAAGCATCAAAGGCAAAGATAATGGATAAGAAGTACCTTGAAGAATTATCGTTTGTATGGTCTCGAGATGCAAAGGACGATTTTAAGAATTCACAATGCGAGATGGATATACTTGGAAATTTACAACCTACCAAGAACCTGAAAAGGCTAGATATTGATGGATACAGGGGCACAAAATTTCCAGAATGGGTTGGAGATCCTTCCTACCATAATTTGACTGATTTATCTTTCTATAATTGTCATAATTGTTGCATCCTGCCCCCACTAGAACAACTACGCTCTCTTAAGAAATTGAGAATTAGTAGAATGAGTATGATCGAGATTATTGGATCTGAATATGGTGATTTTTTTTCAGAGACACTTTTTCCTTCCCTTGAACGTCTTGAGTTCCGTGACATGCCTTGTTGGGAAGTGTGGCATCATCCCCATGAATCAGCTGCTCCCTTCCCTATATTGAAGACCCTTTTGCTTATTGGTTGTCCTATATTACGGGGAAATTTGCCATCTCATCTTCCTGCTTTGGAAGTACTTGTGATTGAACAATGCTACCAACTTGCTTCTTCTCTCCCAAGGTCCCTTGTCATAACTAAACTAGAGGTTTCTGAAAGCAATAAAGTAGCACTACCAGAGCTACTACCACTTTCATTAACAGAGTTAAAAACTCAAGGAAGAGCGGTAATAGAGTCCGTGTTTGAAGCCTTCAGAATCACCTTACCAACTTCTCTTCAAAATTTATACATTGAGAATTGTTCATCTGCAATATCATTTCCGAGAGATTGTTTGCCCACATCCTTGCATTACCTGACTATTAGGAATTGTGAAAATCTAGATTTCCCAATGCAAAACCACCAACTCGAGTCACTTGTGTATTTGTATATAAAAAGGAGTTGTGATTCTCTTAGAACCCTCCCACTGGAAACCTTTCCAAATCTTCGATATCTGGAAATCAGAAACTGTGAAAACATAGAAAATCTTTCTGCTTTGAAGAATCTTCAAAATCTCGCTGATATTAGGATTAGAGGCTGCCCCAATTTTGTATCATTCCCAAGAGAGGGATTGTCTGCGCCAAACTTGAATACATTGCATGTCTCCTGCTGCGTTAATTTAAAGTCACTTCCTTGTCACATACATACTCTTTTCCCAATGTTAGAAAATGTGACAATAGAAGATTGCCCAGAAATTGAGACTTTTCCAGAAGGGGGTATGCCGCCTAGCTTGAGAAAACTTCAGATCTTGAATTGTGAAAAATTATTGAGGAACCCGTTGCTAACTTTGTTGGACATGCTTACCCATCTTTCCATTACTGATGGTTCTGAGTCCTTCCCCAAGGAGGGTTTTGCGATGCTACCTCCCTCCCTTACCTCCCTTACGCTATGCAAAATGTCAAATTTGTTCACTGTGGAGTGTAGGGGGATTCTCCATCTCACATCCCTCCAAAACTTTGAAATTAAAAGCTGTCCCAAGCTGGAGAATATGGTGGGAGACAGACTACCTGCTTCTCTGCTAAAACTTCAAATATATGAATGTCCTCTGCTGGAAGAACGGTGCCGCATGAAACACCCGCAAATCTGGCCCAAACTTTCCCACATCCCAAACATTAAGCTTAACAGCAGTTGGATTTATTAA 3744 0.3886 MAAAVVGEAFLSAFIEVLLDRLASHQVLDLIRGKKLDINLVQRLKNTLYAVEAVLNDAEQKQIHDSAVNKWLDDLKDALYVADDLLDRISTKAATTQKNKEVSTANYFSRFFNFEERDMVCKLEDIVARLEYILNFKDILGLQHIATHHSSWRSPSTSLQDRFTVFGRDQDKEAILKLLLDDDNHKDGISVIPIVGMGGVGKTTLAQSVYNHDTIKQKFNVQAWACVSDHFDELNVAKAILESIVGNACSTDNKELLHRDLKEKLAGKKFLIVLDDVWTEDYDGWNSLLRPLQYGAKGSKILVTTRIQKVASMVQTFQDYSLEKLSDEDCWSVFVNHACLSPEEFSENKNLLRIGKEIVRKCKGLPLAAQSLGGLLRSKRDIKDWDNILNSNIWVNESKIIPALRISYHYLPPYLKRCFVYCSLYPKDHKFFKDKLILLWMAEDLLQPQKNGKTLEEVGYGYFDDLVSRSFFQHSGNKNQSFVMHDLVHDLAILLGGDFYFRTEELGKEMKIGTMTRHLSFRSFSGQVFESFDIFDRAKHLRTFLTNYFKPPPSNIEKASCINLSTLKSLRVLSFHNSPYLDALPDSINELIHLRYLDLSATTIKTLPESLCNLYNLQTLRLHNCRELTWLPNDMQNLVNLRHLDIRGNRKLEEMPVGMSKLNQLHYLSYFVVGKHEENGIKELGTLSNLHGSLSIKKLENVTNSFEASKAKIMDKKYLEELSFVWSRDAKDDFKNSQCEMDILGNLQPTKNLKRLDIDGYRGTKFPEWVGDPSYHNLTDLSFYNCHNCCILPPLEQLRSLKKLRISRMSMIEIIGSEYGDFFSETLFPSLERLEFRDMPCWEVWHHPHESAAPFPILKTLLLIGCPILRGNLPSHLPALEVLVIEQCYQLASSLPRSLVITKLEVSESNKVALPELLPLSLTELKTQGRAVIESVFEAFRITLPTSLQNLYIENCSSAISFPRDCLPTSLHYLTIRNCENLDFPMQNHQLESLVYLYIKRSCDSLRTLPLETFPNLRYLEIRNCENIENLSALKNLQNLADIRIRGCPNFVSFPREGLSAPNLNTLHVSCCVNLKSLPCHIHTLFPMLENVTIEDCPEIETFPEGGMPPSLRKLQILNCEKLLRNPLLTLLDMLTHLSITDGSESFPKEGFAMLPPSLTSLTLCKMSNLFTVECRGILHLTSLQNFEIKSCPKLENMVGDRLPASLLKLQIYECPLLEERCRMKHPQIWPKLSHIPNIKLNSSWIY 1247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08084 1247 PANTHER DISEASE RESISTANCE PROTEIN RP 43 894 IPR044974 GO:0006952
Vivi1g08084 1247 FunFam Probable disease resistance protein At1g61300 149 318 - -
Vivi1g08084 1247 FunFam Probable disease resistance protein At1g63360 408 494 - -
Vivi1g08084 1247 Coils Coil 41 61 - -
Vivi1g08084 1247 SUPERFAMILY L domain-like 483 902 - -
Vivi1g08084 1247 Gene3D - 14 129 - -
Vivi1g08084 1247 Gene3D Ribonuclease Inhibitor 981 1121 IPR032675 -
Vivi1g08084 1247 PRINTS Disease resistance protein signature 191 206 - -
Vivi1g08084 1247 PRINTS Disease resistance protein signature 264 278 - -
Vivi1g08084 1247 PRINTS Disease resistance protein signature 362 376 - -
Vivi1g08084 1247 PRINTS Disease resistance protein signature 636 652 - -
Vivi1g08084 1247 Gene3D - 324 406 IPR042197 -
Vivi1g08084 1247 Gene3D - 149 320 IPR027417 -
Vivi1g08084 1247 SUPERFAMILY L domain-like 904 1232 - -
Vivi1g08084 1247 Gene3D - 407 493 IPR036388 -
Vivi1g08084 1247 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 422 IPR027417 -
Vivi1g08084 1247 Pfam NB-ARC domain 169 390 IPR002182 GO:0043531
Vivi1g08084 1247 Pfam Rx N-terminal domain 10 100 IPR041118 -
Vivi1g08084 1247 Gene3D Ribonuclease Inhibitor 532 936 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08084 Vivi-Chr1 226809065 226815622 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08084 189 657 WRKY Transcription Factor Family AT5G45050 24.319 5.14e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08084 - - vvo:131644921 1558.5