Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08077 ATGGCGGCGGCAGCTGTTGGCGAAGCTTTTCTTTCTGCTTTCATTGAAGTCGTCCTCGACAGGCTTGCTTCTCCGCACCTTGTTGACTTGGTCCGTGGGAAGAAACTTGACGTCAATTTGGTTCAACGGTTGAAGAACACTCTTTATGCTGTTGAAGCCGTGCTTAACGATGCTGAACAGAAGCAGATTCATGACTCTTCTGTTAACAAATGGCTTGATGATCTCAAAGATGCTCTCTATGTTGCTGATGACATTCTCGACCACATCTCCACCAAAGCTGCTCTTTCCAACAACAAGCAGGTCAGTACTGTTAACTACTTCTCTCGCCTTTTCAACTTTGAAGAAAGGGATATGGTTTGTAAGCTGGAAGATATAGTTGCTAGGCTTGAATACATTCTCAATTTCAAAGATATTCTTGGCCTTCAACATATTGCAACTCATCACTCATCCTGGAGATCTCCATCAACCTCTCTAGATCACCCTTCTAACATATTTGGTAGGGATCAAGACAAAGAGGCCATACTCAAATTAATCTTACATGATGATAATGATGTTGATGATAACATTTCCGTGATTCCCATAGTTGGCATGGGTGGGGTGGGAAAAACTACCTTAGCCCAATCTGTGTTTAATACTATAAAGCACAAATTTGATGTTCCAGCGTGGGTTTGTGTTTCCGATGATTTCGATGAACTCAAGGTAACCAAGGCCATCTTAGAGGCAGTTACAGGGAGTTCTTGTAATATAAATAACAAAGAGTTACTTCATCTTGATTTGAAGGAAAGACTGTCAGGAAAAACGTTCTTGATTGTTTTGGATGATGTATGGACTGAAGATTATGACAGTTGGAACTCTCTTATAAGGCCTCTTCAATATGGATCCAAGGGAAGTAAAATTCTTGTAACTACCCGTATTGATAAAGTTGCTTCTATGGTCCAAACTTCTCATGCTTACCCTCTTCAGCAATTGTCTAATGAAGATTGTTGGTCCGTGTTTGCAAACCATGCATGTCTTCCTCAAGAAGAATCCAATCAGTATATGGATCTCCAAAAGACCGGCAAAGAGATTGTTAGAAAATGTAAAGGTTTGCCTTTAGCAGCACAATCACTTGGGGGCTTGTTGCGACGAAAACGTGACATTAGGGATTGGAATAATATACTAAATAGTAACATTTGGGAAAACGAGAGTAAGATCATTCCAGCACTAAGAATTAGTTATCATTATCTCCCTCCCTATTTGAAACGTTGCTTTGTTTATTGTTCCATGTATCCTAAGGATCGTGAATTTAATAGAGACGATTTGATTTTGTTGTGGATGGCTGAAGATCTTTTACCGTCACTAAAAAATGGGAAAACTTTAGAAGAAGTTGGTTATGAGTATTTTAATGAGTTAGCTTCAAGATCATTTTTTCAACGTTCCGGAAGTGGGAACCAATACCAGTGTTTTGTGATGCATGATCTAGTGCATGATTTAGCAACATTGCTTGGTGGAGAATTCTATTTCAGAACAGAAGAACTTGGGAAAGAAACGAAGATCGGTACCAAGACTCGTCATTTATCATTTAACGAGTTCAGATATCCTGTTTTGGAAAACTATGATGTTTTTGGCAGAGCCAAATATCTTAGGACATTTTTCACAAACAGTTTTAGTCATCATAAATTCCATAATGAAAAGGCAGCATGCATCTTTTTTTCAAATTTGAAGTGCTTGAGAGTTTTGTCATTTCGAAACTTTTCTAATCTTGATGCATTGCCTGATTCGATAGATGTATTGATCCATTTGCGTTATTTGGACCTCTCTTGTACATTAATACAAACATTGCCCGAGTCATTGTGTGATTTGTATAATCTACAAACGTTGAAGTTGTACTGTTGTCGAAAACTAACCACTCTTCCCAATAACATGCAAAATCTTGTAAATCTACGCCATCTTGATATCAGTGGACTAAATAAGTTGAAAGAGATGCCTAGAGAAATGAGAAAATTGATTAATTTGCAACATTTGGGTTGCTTTGTCGTGGGAACGCAAGAAGAGAAAGGGATCAAGGAATTGGGAACACTTTCAAATCTTCACGGATCACTTTCCATTAGGAAGTTAGAGAACGTGACCAACAACGTTGAAGCATCACAGGCAAAGATAATGGATAAAAAGTACCTTGATAAATTATCATTTGTATGGTCTGAAGATGCAAAGAACCATTTTACAAGTTCTCAAAGTGAGATGGATATACTTGGAAAGTTACAACCTTCCAAGAACCTGAAAATGCTAGATATTGATGGGTACAGGGGCACACTATTTCCAGAATGGGTTGGACATCCTTCCTACCAAAATTTGTCTAAGGTATCTCTGTCTGGTTGTTTAAATTGTTGTATCCTTCCATCACTTGGACAATTATGCTCTCTCAAGGTCTTGACAATCAGTAAAATGAATATGCTGGAGACTATTGGAACTGAATATGACAATACCTTTTCAGGGACGTATTTTCCTTCCCTTGAACATCTGAAGTTTGTTGAGATGCCATGTTGGAAAGTGTGGCATCATCCTCATGAGTCAAATGTTTATTTTCCAGTATTGAAGTCTATTGTGATTAAAGATTGTCCCATATTACATGGGGATTTGCCATCTTATCTTCCTGCTTTGGACACAATTCGTATTGAAGGATGCAACCAGCTTGTTTCTTCTCTCCCAAGGGCTCCTGCCATCCGCAGATTATACATATTTGAAAGCAATAATATAGCCTTGAATGAGCTACCCCTTTCATTGGAAGAGTTGGATGTTGGAGGAAGTGAGGTGACAGAGTCTGTCTTTGAAGCCATTACCATCACCCCACCAATTTCTCTTAAAATATTAGTCATCAGGGATTGTTCTTCTGCAATATCGTTTCCAAGAGATTGTTTACCCTTATCCTTAGAGAGTTTGTCCATCAAAAATTCTAGTAATCTAGATTTCCCAAAGCCAAATTACGGGCATGAGTCACTTAAGTATCTCTTTATAGATAGAAGTTGTGATTCTCTCATAACCCTCCCATTGGATACCCTTCCCAACCTCCATCATCTGCGTATCGGCAACTGTGAAAACATAGAAAGTCTTTCCGTTTCAAAGGTTCTTCAAAATCTCGATGCTATTAACATTAGTGACTGCCCCAAATTTGTATCATTCCCAGGAGAAGGACTGTCTGCACCCAACTTGACATCATTGTATGTCTCCAACTGTGTCAATTTAAAATCACTGTCTTGTCACATAAATACTCTTCTCCCAAAGTTAGTTAGTATGTCTATATCTGAATGTCCAAAATTGGAGATGTTTCCTGAAGGGGGTATGCCGCCTAGCTTTAGAACAATTTTGATAGCGAATTGCGAAAAATTATTGATGACCACATCTCTAACTTCAATGGACATGCTTACCCATCTTTTCACTGGTGGTCCATGTGATGGTGTCGAGTACTTTCCAAAGAAGGGTTATGCATTGCTACCTCCCTTCCTTACCTACCTGCAGATATTTAACTTTTCAAATTTGCAGACGTTGGATTGCACGGGGCTTCTCCACCTCACTTCCCTGAAAATATTAACAATTAGATTCTGTCCCAAGCTGGAGAATATAGTGGGTGAAAGGCTGCCTGCTTCTCTAACAGAACTTAGTATCTCTGCATGTCCTTTGCTGAAAGAGCAGTACCGGGTGAAATACCCGCAAATTTCCCACATCCCTGGCATTGTAGTTGACGAAAAATGGATTTAG 3735 0.3898 MAAAAVGEAFLSAFIEVVLDRLASPHLVDLVRGKKLDVNLVQRLKNTLYAVEAVLNDAEQKQIHDSSVNKWLDDLKDALYVADDILDHISTKAALSNNKQVSTVNYFSRLFNFEERDMVCKLEDIVARLEYILNFKDILGLQHIATHHSSWRSPSTSLDHPSNIFGRDQDKEAILKLILHDDNDVDDNISVIPIVGMGGVGKTTLAQSVFNTIKHKFDVPAWVCVSDDFDELKVTKAILEAVTGSSCNINNKELLHLDLKERLSGKTFLIVLDDVWTEDYDSWNSLIRPLQYGSKGSKILVTTRIDKVASMVQTSHAYPLQQLSNEDCWSVFANHACLPQEESNQYMDLQKTGKEIVRKCKGLPLAAQSLGGLLRRKRDIRDWNNILNSNIWENESKIIPALRISYHYLPPYLKRCFVYCSMYPKDREFNRDDLILLWMAEDLLPSLKNGKTLEEVGYEYFNELASRSFFQRSGSGNQYQCFVMHDLVHDLATLLGGEFYFRTEELGKETKIGTKTRHLSFNEFRYPVLENYDVFGRAKYLRTFFTNSFSHHKFHNEKAACIFFSNLKCLRVLSFRNFSNLDALPDSIDVLIHLRYLDLSCTLIQTLPESLCDLYNLQTLKLYCCRKLTTLPNNMQNLVNLRHLDISGLNKLKEMPREMRKLINLQHLGCFVVGTQEEKGIKELGTLSNLHGSLSIRKLENVTNNVEASQAKIMDKKYLDKLSFVWSEDAKNHFTSSQSEMDILGKLQPSKNLKMLDIDGYRGTLFPEWVGHPSYQNLSKVSLSGCLNCCILPSLGQLCSLKVLTISKMNMLETIGTEYDNTFSGTYFPSLEHLKFVEMPCWKVWHHPHESNVYFPVLKSIVIKDCPILHGDLPSYLPALDTIRIEGCNQLVSSLPRAPAIRRLYIFESNNIALNELPLSLEELDVGGSEVTESVFEAITITPPISLKILVIRDCSSAISFPRDCLPLSLESLSIKNSSNLDFPKPNYGHESLKYLFIDRSCDSLITLPLDTLPNLHHLRIGNCENIESLSVSKVLQNLDAINISDCPKFVSFPGEGLSAPNLTSLYVSNCVNLKSLSCHINTLLPKLVSMSISECPKLEMFPEGGMPPSFRTILIANCEKLLMTTSLTSMDMLTHLFTGGPCDGVEYFPKKGYALLPPFLTYLQIFNFSNLQTLDCTGLLHLTSLKILTIRFCPKLENIVGERLPASLTELSISACPLLKEQYRVKYPQISHIPGIVVDEKWI 1244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08077 1244 FunFam Probable disease resistance protein At1g63360 406 494 - -
Vivi1g08077 1244 Coils Coil 41 61 - -
Vivi1g08077 1244 PANTHER DISEASE RESISTANCE PROTEIN RP 43 888 IPR044974 GO:0006952
Vivi1g08077 1244 PRINTS Disease resistance protein signature 636 652 - -
Vivi1g08077 1244 PRINTS Disease resistance protein signature 191 206 - -
Vivi1g08077 1244 PRINTS Disease resistance protein signature 262 276 - -
Vivi1g08077 1244 PRINTS Disease resistance protein signature 360 374 - -
Vivi1g08077 1244 SUPERFAMILY L domain-like 889 1222 - -
Vivi1g08077 1244 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 420 IPR027417 -
Vivi1g08077 1244 Gene3D - 15 128 - -
Vivi1g08077 1244 Gene3D - 322 404 IPR042197 -
Vivi1g08077 1244 Gene3D Ribonuclease Inhibitor 946 1230 IPR032675 -
Vivi1g08077 1244 FunFam Probable disease resistance protein At1g61300 149 317 - -
Vivi1g08077 1244 SUPERFAMILY L domain-like 480 959 - -
Vivi1g08077 1244 Gene3D - 149 318 IPR027417 -
Vivi1g08077 1244 Gene3D - 405 493 IPR036388 -
Vivi1g08077 1244 Pfam Rx N-terminal domain 10 98 IPR041118 -
Vivi1g08077 1244 Gene3D Ribonuclease Inhibitor 532 933 IPR032675 -
Vivi1g08077 1244 Pfam NB-ARC domain 171 388 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08077 Vivi-Chr1 226503215 226508649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08077 188 378 WRKY Transcription Factor Family AT5G45050 25.500 2.60e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08077 - - vvo:131644921 1727.99