Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08064 ATGGCGCTCGCTGTTTTTGGTGAAGCATGTCTCTCTGGCTTCATTGAAGTTGTCCTTGACAGGCTTGCCTCTCCTCATGTTGTTGACTTGATCCGTGGGAAGAAACTTGACATCAGTTTAGTCCAAAGGTTGAAGAACACTCTTTATGCTGTTGAAGCTGTGTTGAACGATGCTGAGCAGAAACAGATCAAAGATTCTGCTGTTAACAAATGGCTTGATAATCTCAAAGATGCTCTCTATTTTGCTGATGACATTCTCGATCACATCTCTACCAAAGCTGCTCTTTCCAACCACAACAAGCAGGTCAGTACTGTTAACTACATCTCTCGCTTTTTCAACTCTGAGGAAAGGAATTTGGTTTGTAAGCTGGAAGATATAGTTGCTAAGCTTGAATACATTCTCAATTTCAAAGATATTCTTGGCCTTCAACATATTGCAACTCATCACTCTTCCTGGAGATCTCCATCAACCTCTCTAGATTACCCATCTAACATATTTGGTAGGGATCAAGACAAACAGGCCATACTCAAATTAATCTTAGATGCTGATAATGATGTTGATGATAACATTTCTGTGATTCCCATAGTTGGTATGGGCGGGGTGGGAAAAACTACCTTAGCCCAATCTGTGTTCAACCATGATACTATAAAGCAGAAATTTGATGTTCAAGCGTGGGTTTGTGTTTCCGATGATTTCGATGAACTCAAGGTAACCAAGGCCATCTTAGAGGCAGTTGCAGGGAGTTCTTGTAATATAAATAACAAAGAGTTACTTCATCTTGATTTGAAGGAAAGACTGTCTGGAAAAACGTTCTTGATTGTTTTGGATGATGTATGGACTGACGATTATGACAGTTGGAACTCTCTTATAAGGCCTCTTCAATATGGAACTAAGGGAAGTAAAATTCTTGTAACTACCCGTATTGATAAAGTTGCTTCTATGGTCCAAACTTCTCATGCTTACCCTCTTCAACAATTGTCTGATGAAGATTGTTGGTCCGTATTTGCAAACCATGCATGTCTTCCTCAAGAAGAATCCAATGAGCATATGGTTCTCCAAAAGACTGGAAAAGAGATTGTTAGAAAATGTAAAGGATTGCCTTTAGCAGCACAATCACTTGGGGGCTTGTTGCGACGAAAGCGTGACATTAGGGACTGGAATAATATACTAAATAGCAACATTTGGGAAAATGAGAGTAAGATCATTCCAGCACTAAGAATTAGTTATCATTATCTCCCTCCCTATTTGAAACGTTGTTTCGTTTATTGTTCACTGTATCCTAAGGATTACAAGTTCGATAAAGACGAGTTGATCTTGTTGTGGATGGCTGAAGATCTTTTACCGTCTCTAAAAAATGGGAAGACTTTAGAAGAAGTTGGTAATGAGTATTTTAATGATTTAGCTTCAAGGTCGTTCTTTCAACGTTCGGGAAGTGGAAACCAATACCAGCGTTTTGTGATGCACGATCTGGTGCATGATTTAGCAACCTTGCTTGGTGGAGAATTCTATTTCAGAACAGATGAACTTGGGAAAGAATCAAAGATCAGTACCAAGACTCGTCATTTGTCATTTATTGGGTTCAGTGATCCTGTCTTGGAAAACTATGATGTTTTCAGCAGAGCAAAAAACCTTAGGACGTTTTTGACAACCAGTTTTAGATTTCCTCGAGTCAACTATGAAAAGGCACCATGCATCATTTTGGAGAATTTGAAGTGTTTAAGAGTTTTGTCATTTCAATCTTTTGATGATCTTGACTCATTGCCTGATTCAATAGATGAACTAATCCATTTGCGTTATTTGGACCTCTCTTTCACAGATATACAAACTTTGCCGGAGTCATTGTGTAATTTGTATAATCTACAAACGTTGAAGTTGTGCTATTGCGAACAACTAACCATGCTTCCAAATGACATGCAAAATCTTGTAAATTTGCGCCATCTTGATATCAGTGGAACTAATCAGTTAGAAGAGATGCCTAGAGAAATGAGCAAATTAAATCATTTGCAACATCTGAGTTGCTTTGTTGTGGGCAAGCATGAAAAGAATGGGATCAAGGAACTGGGAACATTTTCAAATCTTCATGGATCACTTTTAATTAGTAAATTGGAGAATGTTACCAACAGCTTGGAAGCATCAGAGGCACATATCATGGATAAGAAGTACCTTGAGGAATTATCGTTTGAATGGTCAAAAGACGCAAAGGACCATTTTACAAATTCACAAATTGAGATGGATATACTTGGCAAGTTACATCCTGTCAAGAAGTTGAAAAGGCTATATATAAGGGGATACAGAGGGACAAGATTTCCAGAATGGATTGGAGATCCTTCCTACCATAATTTGACTGAGATATCTTTGAATTGTTGTCATAATTGTTGCATCCTTCCACCACTTGGACAATTACGCTCTCTCAAGGACTTGAAAATCTATGAAATGAGTATGATGGAGACTATTGGATCTGAATATGGTGATTCCTTTTCAGGAATCCTCTTTCCCTCCCTTGAACGTCTGGAGTTTAGTAAGATGCCATGTTGGGAAGTGTGGCATCATTCTCATGAGTCAGATGGTTCATTTCCTGTATTAAAGTCTCTTGTGATTGTTGATTGTCCCAGATTACATGGTGGTTTGCCATCTCATCTTCCTGTTGTGGAAACAATTAAGATTGAACGTTGCAACCAACTTGACTCTTCATTCCCAAGGGCTCCTGCCATCCGTGAGTTTTGCACAATTGGAAGCAATAAAATAGGCTTGCATGAACTACCCATTTCATTGGAAGAATTAAGAATTCAAGGAAGAGAAATGACAGAGTCCGTCTTTGAAGCCATTGCCATCAGCCTAACATCTCTTCAAATTTTAGATATCAAGGACTGTTTGTCTGCGATATCATTTCCGGGGGATCGTTTACCCTTTTCCTTAAAGAGTTTTTCCATCAGAAATTCTAGTAATCTGAATTTTCCAAAGCAAAACCACCAACATGAGTCACTTCAGTCTTTGAGTATAGATAGCAGTTGCGATTCTCTCACAACCCTCCCATTGGAGATCCTTCCAAACCTCATTTCTCTTGGAATCTGTAATTGTGTAAACATAGAATGCCTTTCAGCTTCAAAAATTCTTCCAAATCTCATTGATCTTTACATTAGTGACTGTCCTAAATTTGTATCATTCCCAAGAGAAGGATTGTCTGCACCCAATTTGACAAGGTTGCATGTCGGCCGGTGCCTTAATTTAAAGTCATTGCCTTGTCACATAAATAATCTTCTTCCAAAGTTAAAAGAGTTGGAAATATGTAATTGCCCGGAGATGGAAACATTTCCTGAAGGTGGTATGCCACCTAGCTTGAGAAAACTTAAAGTTCGGAATTGCGAGAAATTATTGAGAAACCCATCTTTATCTTTCTTTGACATGCTTTCCCATCTTTCAGTTGGAGATTTACATGTTGGTGTTGAGTCCTTTCCTAACAAGGATTTTGCATTGCTGCCCCCCTCCCTTACCTCTCTAGTTCTTTACAATATGAGTTGTTTGCACACGTTGGATTGCAGAGGGCTTCTCCACCTGACGTCTCTCCAACAATTAACAATTCATTCTTGCCCAAAGCTTGAGAATATGGTGGGAGACAGGCTGCCTGCTTCTCTAATAAAACTTCAAATTTTTAGGTGTCCTATGTTGAGAGAACGATGCCTCAAAAAACACTCTCTAATTTGGCCCAAAATTTCCCACATCCGACGTATTGAGGTTAACTACAGATGGATTTAG 3753 0.3888 MALAVFGEACLSGFIEVVLDRLASPHVVDLIRGKKLDISLVQRLKNTLYAVEAVLNDAEQKQIKDSAVNKWLDNLKDALYFADDILDHISTKAALSNHNKQVSTVNYISRFFNSEERNLVCKLEDIVAKLEYILNFKDILGLQHIATHHSSWRSPSTSLDYPSNIFGRDQDKQAILKLILDADNDVDDNISVIPIVGMGGVGKTTLAQSVFNHDTIKQKFDVQAWVCVSDDFDELKVTKAILEAVAGSSCNINNKELLHLDLKERLSGKTFLIVLDDVWTDDYDSWNSLIRPLQYGTKGSKILVTTRIDKVASMVQTSHAYPLQQLSDEDCWSVFANHACLPQEESNEHMVLQKTGKEIVRKCKGLPLAAQSLGGLLRRKRDIRDWNNILNSNIWENESKIIPALRISYHYLPPYLKRCFVYCSLYPKDYKFDKDELILLWMAEDLLPSLKNGKTLEEVGNEYFNDLASRSFFQRSGSGNQYQRFVMHDLVHDLATLLGGEFYFRTDELGKESKISTKTRHLSFIGFSDPVLENYDVFSRAKNLRTFLTTSFRFPRVNYEKAPCIILENLKCLRVLSFQSFDDLDSLPDSIDELIHLRYLDLSFTDIQTLPESLCNLYNLQTLKLCYCEQLTMLPNDMQNLVNLRHLDISGTNQLEEMPREMSKLNHLQHLSCFVVGKHEKNGIKELGTFSNLHGSLLISKLENVTNSLEASEAHIMDKKYLEELSFEWSKDAKDHFTNSQIEMDILGKLHPVKKLKRLYIRGYRGTRFPEWIGDPSYHNLTEISLNCCHNCCILPPLGQLRSLKDLKIYEMSMMETIGSEYGDSFSGILFPSLERLEFSKMPCWEVWHHSHESDGSFPVLKSLVIVDCPRLHGGLPSHLPVVETIKIERCNQLDSSFPRAPAIREFCTIGSNKIGLHELPISLEELRIQGREMTESVFEAIAISLTSLQILDIKDCLSAISFPGDRLPFSLKSFSIRNSSNLNFPKQNHQHESLQSLSIDSSCDSLTTLPLEILPNLISLGICNCVNIECLSASKILPNLIDLYISDCPKFVSFPREGLSAPNLTRLHVGRCLNLKSLPCHINNLLPKLKELEICNCPEMETFPEGGMPPSLRKLKVRNCEKLLRNPSLSFFDMLSHLSVGDLHVGVESFPNKDFALLPPSLTSLVLYNMSCLHTLDCRGLLHLTSLQQLTIHSCPKLENMVGDRLPASLIKLQIFRCPMLRERCLKKHSLIWPKISHIRRIEVNYRWI 1250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08064 1250 PANTHER DISEASE RESISTANCE PROTEIN RP 43 891 IPR044974 GO:0006952
Vivi1g08064 1250 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 423 IPR027417 -
Vivi1g08064 1250 Gene3D - 15 130 - -
Vivi1g08064 1250 Coils Coil 41 61 - -
Vivi1g08064 1250 Pfam NB-ARC domain 188 391 IPR002182 GO:0043531
Vivi1g08064 1250 Gene3D - 152 321 IPR027417 -
Vivi1g08064 1250 Pfam Rx N-terminal domain 12 100 IPR041118 -
Vivi1g08064 1250 SUPERFAMILY L domain-like 904 1238 - -
Vivi1g08064 1250 PRINTS Disease resistance protein signature 192 207 - -
Vivi1g08064 1250 PRINTS Disease resistance protein signature 639 655 - -
Vivi1g08064 1250 PRINTS Disease resistance protein signature 363 377 - -
Vivi1g08064 1250 PRINTS Disease resistance protein signature 265 279 - -
Vivi1g08064 1250 FunFam Probable disease resistance protein At1g61300 150 320 - -
Vivi1g08064 1250 FunFam Probable disease resistance protein At1g63360 409 497 - -
Vivi1g08064 1250 Gene3D - 325 407 IPR042197 -
Vivi1g08064 1250 Gene3D Ribonuclease Inhibitor 533 911 IPR032675 -
Vivi1g08064 1250 SUPERFAMILY L domain-like 486 894 - -
Vivi1g08064 1250 Gene3D Ribonuclease Inhibitor 1110 1232 IPR032675 -
Vivi1g08064 1250 Gene3D Ribonuclease Inhibitor 912 1109 IPR032675 -
Vivi1g08064 1250 SMART LRR_typ_2 594 617 IPR003591 -
Vivi1g08064 1250 SMART LRR_typ_2 641 665 IPR003591 -
Vivi1g08064 1250 Gene3D - 408 496 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08064 Vivi-Chr1 225915907 225920460 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08064 189 669 WRKY Transcription Factor Family AT5G45050 23.719 1.51e-13 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08064 - - vvo:131644921 1919.82