Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08062 ATGGCGGTGGTTGCTGTTGGTGAAGCATTTCTCTCCGCTTTCATTGAAGTTGTCATCGACAGGCTTGCTTCTCCTCAGGTTGTTGACTTGATCCGTGGGAAGAAACTTGACGTCAATTTGGTTCAACGGTTGAAGAACACTCTTTACGCTGTTGAAGCTGTGCTTAACGATGCTGAACAGAAGCAGATTCATGACTCTGCTGTTAACAACTGGCTTGATGATCTCAAAGACGCTCTCTATGTTGCTGATGACATTCTCGACCACATCTCCACCAAAGCTGCTCTTTCCAAGAAGAACAAGCAGGTGAGTACTGTTAACTACTTCTCCCGCCTTTTCAACTTTGAAGAAAGGGATATGGTTCGTAAGCTGGAAGATATAGTTGCCAGACTTGAATCCATTCTCAAACTTAAAGATATTCTTGGTCTTCAACTTATTGCAACTCATCACTCATCCTGGAGAACTCCATCTACCTCTTTAGAAGACAGATCTGTCATATTTGGTAGGGATCAAGACAAAGAGGCCATACTCAAATTACTCTTACACGATGATGATGACACTGCTGTCATCCCCATTGTTGGCATGGGTGGCCTTGGAAAAACAACTTTAGCCCAATTTGTGTACAACCATGACAGTATAAAGCACAAATTTGATGTTCAAGCATGGGTTTGTGTTTCTGATGATTTCGATGTTTTGAAGGTTACCAAGTTCATTGCGGAGGAAGTGGGAAGTGCTTGTAACACAAATAACTTGAATATCCTTCATCGAGATTTGAAGGAAAAGCTGACCGGAAAGAGGTTCTTAATTGTTTTGGATGATGTCTGGACCGAGGATCACGACTCTTGGAATTCTCTTTTAAAGCCTCTTCAATATGGAACTATGGGAAGTAAAATTCTTGTAACTACCCGTATTGAAAAAGTTGCTTCTATGGTCCAAACTATTCAACCTTACTCTCTTCACCAATTGTCTGACGAAGATTGTTGGTCAGTGTTTGCTAACAATGCTTGCCTTTCTCCAGATGAGAATATGGATCTCCAAAAAATTGGCAAAGAGATTGTTAAAAAATGTAAGGGATTGCCTTTAGCAGCTCAGTCACTTGGGCGCTTGTTGCGAGAAAAACGTGACATCAGGGATTGGAATAGTATACTGAATAATAATATTTGGGAGAATAAGAGTAAGATCATTCCAGCATTGAGAATTAGTTATCATTATCTCCCCCCATATTTAAAGCGTTGCTTTGTATATTGTTCATTGTTTCCCAAAGATTATAAATTTGATAAAGATGAATTGATCTTGTTGTGGATGGCGGAGGATCTTTTACATCCTTCAGAAAATAACAAGACTTTAGAAGAAGTTGGTCATGGGTATTTTAATGACTTAGTTTCCAAATCATTTTTTCAACATTCTGACAATGGGAACTTCAACCAACATTTTGTAATGCATGATCTTGTGCATGATTTGGCAACATGGCTTGGTGGAGAATTCTATTTTAGAACAGAAGTAATTGGGAAAGATACGATGATTGGTACCAAGACTCGTCATTTGTCATTTTCCAAGTTCAGTGATCCAATCTCAGCAAACTTTGATATTTTCGGTAGAATAAAATGTCTAAGAACAATCTCGCCAATATATTTATGGAGTGATCCATTCAACAAAGAAAAAGCGTCATGCTTCATTTTGTCAAATTTGAAGTACTTGAGAGTTTTGAAGTTTGGCAACTTTGAAGGTCTTGATGCATTTCTTGATTCAATAGATGAACTAATCCATTTGCGTTATTTGGATCTCTCTTACACATCTATAAAAATGTTACCTGAATCATTATGTAACTTGTATAATCTACAAACATTAAAGTTGCACCACTGTATCCGTCTAACAAGGCTTCCCAATGACATGCAAAATCTTGTAAATTTGCGCCATCTGGAAATTCAGGGAACTAATTTAGAAGAGATGCCTAGAGAAATGAGCAAACTGATTAATTTGCAACATTTGGGTTGCTTTGTTGTGGGAACGCTGGAAGAGAAAGGGATCAAGGAATTGGGAACACTTTCGAATCTACTTGGATCACTTTCCATTACGAAGTTAGAGAACGTGACCAACGGATTTGAAGCATCACAGGCAAAGATAATGGATAAAAAGTACCTTGATAAATTATCATTTGTATGGTCTGAAGATGCAAAGAACCATTTTACCAGTTCACAAAGTGAGATGGATATACTTGGAAAGTTACAACCTTCCAAGAACCTGAAAATGCTAGGTATTCATGGATACAGAGGCACACTATTTCCAGAATGGGTTGGACATTCTTCCTACCAAAATTTGACTCAGGTATCTTTGTATGGTTGTTTGAATTGTTGTATCCTTCCATCACTCGGACAATTATACTCTCTCAAGGTCTTGACAATCAGTGAAATGAATATGCTGGAGACTATTGGATCTGAATATGATGATACCTTTTCAGGGACATACTTTCCTTCCCTTGAATGTCTGGAGTTTGTCAAGATGTCATGTTGGAGAGTGTGGCATCATCCTCCTGAGTCAAATGCTCATTTTCCAGTATTGAAGTATATTGAGATTAATGATTGTCCCATATTACATGGGGATTTGCCATCTTATCTTCCTGCTTTGGAAACAATTCGTATTGATGGATGCAACCAGCTTGTTTCTTCTCTCCCAAGGGCTCCTGCCATCCGCAGATTATACATATTTGAAAGCAATAATATAGCCTTGAATGAGCTACCCCTTTCATTGGAAGAGTTAGATGTTGGAGGAAGTGAGGTGACAGAGTCTGTCTTTGAAGCCATTACCATCACCCCACCAATTTCTCTTAAAATATTAGCCATCAAGGATTGTTCTTCTGCGATATCGTTTCCAAGAGATTGTTTACCCTTATCCTTAGAGAGTTTGTCCATCACAAATTCTAATAATCTAGATTTCCCAAAGCAAAATCACGTGCATGAGTCACTTAAGTATCTTCGTATAAATAGGAGTTGTGATACTCTCATAACCCTCCCACTGGATACCATTCCCAACCTTCATCATCTGCAAATCCACAATTGTGAAAACTTAGAATGTCTTTCTGTCTCAAAGTCTCTTCAAAATCTAGTTTATATTGAAATTCGTGACTGCCCCAAATTTGTATCATTCCCAAGAGAAGGACTGTCTGCACCCAACTTGACATTATTGTTTGTCTCCAACTGTGTCAACTTAAAATCACTGCCTTGTCATATAAGTACTCTTCTCCCAAAGTTAGAGCGTGTGTGTATATGTGATTGTCCAAAATTGGAGACGTTTCCTAAAGGGGGTATGCCACCTAGCTTGAGAGCAATTTGGATTGGGAATTGTGAAAAATTAATGATGAGCTCATCTCTAACTTCAATGGACATGCTTACCCATCTTTCCATTGATGGTCCATGTGATGGTGTCGAGTACTTTCCAAAGAAGGGTTATCCATTGCTGCACCCCTCCCTTACCTACCTGCATATATATAACTGTTCAAGTTTGCACACGTTGGATTGCACGGAGCTTCTCCACCTCACTTCCCTGCAAACATTAATAATTAGATGTTGTCCCAAGCTGGAGAATATAGTGGGAGAAAGGCTGCCTGCTTCTCTAATAGAACTTAAAATCTCTGCATGTCCTTTGCTGAAAGAACAGTACCGCGTGAAATACCCACAAATTTCCCACATCCCTGGCATTACAGTTGACGGAAAATGGATTTAG 3717 0.389 MAVVAVGEAFLSAFIEVVIDRLASPQVVDLIRGKKLDVNLVQRLKNTLYAVEAVLNDAEQKQIHDSAVNNWLDDLKDALYVADDILDHISTKAALSKKNKQVSTVNYFSRLFNFEERDMVRKLEDIVARLESILKLKDILGLQLIATHHSSWRTPSTSLEDRSVIFGRDQDKEAILKLLLHDDDDTAVIPIVGMGGLGKTTLAQFVYNHDSIKHKFDVQAWVCVSDDFDVLKVTKFIAEEVGSACNTNNLNILHRDLKEKLTGKRFLIVLDDVWTEDHDSWNSLLKPLQYGTMGSKILVTTRIEKVASMVQTIQPYSLHQLSDEDCWSVFANNACLSPDENMDLQKIGKEIVKKCKGLPLAAQSLGRLLREKRDIRDWNSILNNNIWENKSKIIPALRISYHYLPPYLKRCFVYCSLFPKDYKFDKDELILLWMAEDLLHPSENNKTLEEVGHGYFNDLVSKSFFQHSDNGNFNQHFVMHDLVHDLATWLGGEFYFRTEVIGKDTMIGTKTRHLSFSKFSDPISANFDIFGRIKCLRTISPIYLWSDPFNKEKASCFILSNLKYLRVLKFGNFEGLDAFLDSIDELIHLRYLDLSYTSIKMLPESLCNLYNLQTLKLHHCIRLTRLPNDMQNLVNLRHLEIQGTNLEEMPREMSKLINLQHLGCFVVGTLEEKGIKELGTLSNLLGSLSITKLENVTNGFEASQAKIMDKKYLDKLSFVWSEDAKNHFTSSQSEMDILGKLQPSKNLKMLGIHGYRGTLFPEWVGHSSYQNLTQVSLYGCLNCCILPSLGQLYSLKVLTISEMNMLETIGSEYDDTFSGTYFPSLECLEFVKMSCWRVWHHPPESNAHFPVLKYIEINDCPILHGDLPSYLPALETIRIDGCNQLVSSLPRAPAIRRLYIFESNNIALNELPLSLEELDVGGSEVTESVFEAITITPPISLKILAIKDCSSAISFPRDCLPLSLESLSITNSNNLDFPKQNHVHESLKYLRINRSCDTLITLPLDTIPNLHHLQIHNCENLECLSVSKSLQNLVYIEIRDCPKFVSFPREGLSAPNLTLLFVSNCVNLKSLPCHISTLLPKLERVCICDCPKLETFPKGGMPPSLRAIWIGNCEKLMMSSSLTSMDMLTHLSIDGPCDGVEYFPKKGYPLLHPSLTYLHIYNCSSLHTLDCTELLHLTSLQTLIIRCCPKLENIVGERLPASLIELKISACPLLKEQYRVKYPQISHIPGITVDGKWI 1238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08062 1238 Gene3D Ribonuclease Inhibitor 549 910 IPR032675 -
Vivi1g08062 1238 SUPERFAMILY L domain-like 893 1217 - -
Vivi1g08062 1238 Gene3D Ribonuclease Inhibitor 1099 1222 IPR032675 -
Vivi1g08062 1238 Coils Coil 41 61 - -
Vivi1g08062 1238 PRINTS Disease resistance protein signature 790 806 - -
Vivi1g08062 1238 PRINTS Disease resistance protein signature 355 369 - -
Vivi1g08062 1238 PRINTS Disease resistance protein signature 188 203 - -
Vivi1g08062 1238 PRINTS Disease resistance protein signature 260 274 - -
Vivi1g08062 1238 SUPERFAMILY L domain-like 478 897 - -
Vivi1g08062 1238 Gene3D - 400 488 IPR036388 -
Vivi1g08062 1238 SMART LRR_typ_2 586 609 IPR003591 -
Vivi1g08062 1238 SMART LRR_typ_2 633 656 IPR003591 -
Vivi1g08062 1238 Gene3D - 15 129 - -
Vivi1g08062 1238 Gene3D - 149 314 IPR027417 -
Vivi1g08062 1238 FunFam Probable disease resistance protein At1g63360 401 489 - -
Vivi1g08062 1238 Gene3D Ribonuclease Inhibitor 911 1091 IPR032675 -
Vivi1g08062 1238 PANTHER DISEASE RESISTANCE PROTEIN RP 43 860 IPR044974 GO:0006952
Vivi1g08062 1238 FunFam Probable disease resistance protein At1g61300 150 314 - -
Vivi1g08062 1238 Pfam Rx N-terminal domain 10 101 IPR041118 -
Vivi1g08062 1238 Gene3D - 320 399 IPR042197 -
Vivi1g08062 1238 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 415 IPR027417 -
Vivi1g08062 1238 Pfam NB-ARC domain 169 384 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08062 Vivi-Chr1 225865703 225873574 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08062 185 672 WRKY Transcription Factor Family AT5G45050 23.845 1.72e-12 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08062 - - vvo:131644921 1536.16