Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08059 ATGCTCGTGCTCATGCTCTGCTTCTCAGCATTTCTCTCCGCTTTCATTGAAGTTGTCATCGACAGGCTTGCTTCTCCTCAGGTTGTTGACTTGATCCGTGGGAAGAAACTTGACGTCAATTTGGTTCAACGGTTGAAGAACACTCTTTACGCTGTTGAAGCTGTGCTTAACGATGCTGAACAGAAGCAGATTCATGACTCTGCTGTTAACAACTGGCTTGATGATCTCAAAGACGCTCTCTATGTTGCTGATGACATTCTCGACCACATCTCCACCAAAGCTGCTCTTTCCAAGAAGAACAAGCAGGTGAGTACTGTTAACTACTTCTCCCGCCTTTTCAACTTTGAAGAAAGGGATATGGTTCGTAAGCTGGAAGATATAGTTGCCAGACTTGAATCCATTCTCAAACTTAAAGATATTCTTGGTCTTCAACTTATTGCAACTCATCACTCATCCTGGAGAACTCCATCTACCTCTTTAGAAGACAGATCTGTCATATTTGGTAGGGATCAAGACAAAGAGGCCATACTCAAATTACTCTTACACGATGATGATGACACTGCTGTCATCCCCATTGTTGGCATGGGTGGCCTTGGAAAAACAACTTTAGCCCAATTTGTGTACAACCATGACAGTATAAAGCACAAATTTGATGTTCAAGCATGGGTTTGTGTTTCTGATGATTTCGATGTTTTGAAGGTTACCAAGTTCATTGCGGAGGAAGTGGGAAGTGCTTGTAACACAAATAACTTGAATATCCTTCATCGAGATTTGAAGGAAAAGCTGACCGGAAAGAGGTTCTTAATTGTTTTGGATGATGTCTGGACCGAGGATCACGACTCTTGGAATTCTCTTTTAAAGCCTCTTCAATATGGAACTATGGGAAGTAAAATTCTTGTAACTACCCGTATTGAAAAAGTTGCTTCTATGGTCCAAACTATTCAACCTTACTCTCTTCACCAATTGTCTGACGAAGATTGTTGGTCAGTGTTTGCTAACAATGCTTGCCTTTCTCCAGATGAGAATATGGATCTCCAAAAAATTGGCAAAGAGATTGTTAAAAAATGTAAGGGATTGCCTTTAGCAGCTCAGTCACTTGGGCGCTTGTTGCGAGAAAAACGTGACATCAGGGATTGGAATAGTATACTGAATAATAATATTTGGGAGAATAAGAGTAAGATCATTCCAGCATTGAGAATTAGTTATCATTATCTCCCCCCATATTTAAAGCGTTGCTTTGTATATTGTTCATTGTTTCCCAAAGATTATAAATTTGATAAAGATGAATTGATCTTGTTGTGGATGGCGGAGGATCTTTTACATCCTTCAGAAAATAACAAGACTTTAGAAGAAGTTGGTCATGGGTATTTTAATGACTTAGTTTCCAAATCATTTTTTCAACATTCTGACAATGGGAACTTCAACCAACATTTTGTAATGCATGATCTTGTGCATGATTTGGCAACATGGCTTGGTGGAGAATTCTATTTTAGAACAGAAGTAATTGGGAAAGATACGATGATTGGTACCAAGACTCGTCATTTGTCATTTTCCAAGTTCAGTGATCCAATCTCAGCAAACTTTGATATTTTCGGTAGAATAAAATGTCTAAGAACAATCTCGCCAATATATTTATGGAGTGATCCATTCAACAAAGAAAAAGCGTCATGCTTCATTTTGTCAAATTTGAAGTACTTGAGAGTTTTGAAGTTTGGCAACTTTGAAGGTCTTGATGCATTTCTTGATTCAATAGATGAACTAATCCATTTGCGTTATTTGGATCTCTCTTACACATCTATAAAAATGTTACCTGAATCATTATGTAACTTGTATAATCTACAAACATTAAAGTTGCACCACTGTATCCGTCTAACAAGGCTTCCCAATGACATGCAAAATCTTGTAAATTTGCGCCATCTGGAAATTCAGGGAACTAATTTAGAAGAGATGCCTAGAGAAATGAGCAAACTGATTAATTTGCAACATTTGGGTTGCTTTGTTGTGGGAACGCTGGAAGAGAAAGGGATCAAGGAATTGGGAACACTTTCGAATCTACTTGGATCACTTTCCATTACGAAGTTAGAGAACGTGACCAACGGATTTGAAGCATCACAGGCAAAGATAATGGATAAAAAGTACCTTGATAAATTATCATTTGTATGGTCTGAAGATGCAAAGAACCATTTTACCAGTTCACAAAGTGAGATGGATATACTTGGAAAGTTACAACCTTCCAAGAACCTGAAAATGCTAGGTATTCATGGATACAGAGGCACACTATTTCCAGAATGGGTTGGACATTCTTCCTACCAAAATTTGACTCAGGTATCTTTGTATGGTTGTTTGAATTGTTGTATCCTTCCATCACTCGGACAATTATACTCTCTCAAGGTCTTGACAATCAGTGAAATGAATATGCTGGAGACTATTGGATCTGAATATGATGATACCTTTTCAGGGACATACTTTCCTTCCCTTGAATGTCTGGAGTTTGTCAAGATGTCATGTTGGAGAGTGTGGCATCATCCTCCTGAGTCAAATGCTCATTTTCCAGTATTGAAGTATATTGAGATTAATGATTGTCCCATATTACATGGGGATTTGCCATCTTATCTTCCTGCTTTGGAAACAATTCGTATTGATGGATGCAACCAGCTTGTTTCTTCTCTCCCAAGGGCTCCTGCCATCCGCAGATTATACATATTTGAAAGCAATAATATAGCCTTGAATGAGCTACCCCTTTCATTGGAAGAGTTAGATGTTGGAGGAAGTGAGGTGACAGAGTCTGTCTTTGAAGCCATTACCATCACCCCACCAATTTCTCTTAAAATATTAGCCATCAAGGATTGTTCTTCTGCGATATCGTTTCCAAGAGATTGTTTACCCTTATCCTTAGAGAGTTTGTCCATCACAAATTCTAATAATCTAGATTTCCCAAAGCAAAATCACGTGCATGAGTCACTTAAGTATCTTCGTATAAATAGGAGTTGTGATACTCTCATAACCCTCCCACTGGATACCATTCCCAACCTTCATCATCTGCAAATCCACAATTGTGAAAACTTAGAATGTCTTTCTGTCTCAAAGTCTCTTCAAAATCTAGTTTATATTGAAATTCGTGACTGCCCCAAATTTGTATCATTCCCAAGAGAAGGACTGTCTGCACCCAACTTGACATTATTGTTTGTCTCCAACTGTGTCAACTTAAAATCACTGCCTTGTCATATAAGTACTCTTCTCCCAAAGTTAGAGCGTGTGTGTATATGTGATTGTCCAAAATTGGAGACGTTTCCTAAAGGGGGTATGCCACCTAGCTTGAGAGCAATTTGGATTGGGAATTGTGAAAAATTAATGATGAGCTCATCTCTAACTTCAATGGACATGCTTACCCATCTTTCCATTGATGGTCCATGTGATGGTGTCGAGTACTTTCCAAAGAAGGGTTATCCATTGCTGCACCCCTCCCTTACCTACCTGCATATATATAACTGTTCAAGTTTGCACACGTTGGATTGCACGGAGCTTCTCCACCTCACTTCCCTGCAAACATTAATAATTAGATGTTGTCCCAAGCTGGAGAATATAGTGGGAGAAAGGCTGCCTGCTTCTCTAATAGAACTTAAAATCTCTGCATGTCCTTTGCTGAAAGAACAGTACCGCGTGAAATACCCACAAATTTCCCACATCCCTGGCATTACAGTTGACGGAAAATGGATTTAG 3720 0.389 MLVLMLCFSAFLSAFIEVVIDRLASPQVVDLIRGKKLDVNLVQRLKNTLYAVEAVLNDAEQKQIHDSAVNNWLDDLKDALYVADDILDHISTKAALSKKNKQVSTVNYFSRLFNFEERDMVRKLEDIVARLESILKLKDILGLQLIATHHSSWRTPSTSLEDRSVIFGRDQDKEAILKLLLHDDDDTAVIPIVGMGGLGKTTLAQFVYNHDSIKHKFDVQAWVCVSDDFDVLKVTKFIAEEVGSACNTNNLNILHRDLKEKLTGKRFLIVLDDVWTEDHDSWNSLLKPLQYGTMGSKILVTTRIEKVASMVQTIQPYSLHQLSDEDCWSVFANNACLSPDENMDLQKIGKEIVKKCKGLPLAAQSLGRLLREKRDIRDWNSILNNNIWENKSKIIPALRISYHYLPPYLKRCFVYCSLFPKDYKFDKDELILLWMAEDLLHPSENNKTLEEVGHGYFNDLVSKSFFQHSDNGNFNQHFVMHDLVHDLATWLGGEFYFRTEVIGKDTMIGTKTRHLSFSKFSDPISANFDIFGRIKCLRTISPIYLWSDPFNKEKASCFILSNLKYLRVLKFGNFEGLDAFLDSIDELIHLRYLDLSYTSIKMLPESLCNLYNLQTLKLHHCIRLTRLPNDMQNLVNLRHLEIQGTNLEEMPREMSKLINLQHLGCFVVGTLEEKGIKELGTLSNLLGSLSITKLENVTNGFEASQAKIMDKKYLDKLSFVWSEDAKNHFTSSQSEMDILGKLQPSKNLKMLGIHGYRGTLFPEWVGHSSYQNLTQVSLYGCLNCCILPSLGQLYSLKVLTISEMNMLETIGSEYDDTFSGTYFPSLECLEFVKMSCWRVWHHPPESNAHFPVLKYIEINDCPILHGDLPSYLPALETIRIDGCNQLVSSLPRAPAIRRLYIFESNNIALNELPLSLEELDVGGSEVTESVFEAITITPPISLKILAIKDCSSAISFPRDCLPLSLESLSITNSNNLDFPKQNHVHESLKYLRINRSCDTLITLPLDTIPNLHHLQIHNCENLECLSVSKSLQNLVYIEIRDCPKFVSFPREGLSAPNLTLLFVSNCVNLKSLPCHISTLLPKLERVCICDCPKLETFPKGGMPPSLRAIWIGNCEKLMMSSSLTSMDMLTHLSIDGPCDGVEYFPKKGYPLLHPSLTYLHIYNCSSLHTLDCTELLHLTSLQTLIIRCCPKLENIVGERLPASLIELKISACPLLKEQYRVKYPQISHIPGITVDGKWI 1239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08059 1239 Gene3D - 321 400 IPR042197 -
Vivi1g08059 1239 Gene3D - 401 489 IPR036388 -
Vivi1g08059 1239 FunFam Probable disease resistance protein At1g63360 402 490 - -
Vivi1g08059 1239 Pfam Rx N-terminal domain 11 102 IPR041118 -
Vivi1g08059 1239 Gene3D Ribonuclease Inhibitor 912 1092 IPR032675 -
Vivi1g08059 1239 SUPERFAMILY L domain-like 894 1218 - -
Vivi1g08059 1239 Gene3D - 150 315 IPR027417 -
Vivi1g08059 1239 FunFam Probable disease resistance protein At1g61300 151 315 - -
Vivi1g08059 1239 PRINTS Disease resistance protein signature 356 370 - -
Vivi1g08059 1239 PRINTS Disease resistance protein signature 189 204 - -
Vivi1g08059 1239 PRINTS Disease resistance protein signature 261 275 - -
Vivi1g08059 1239 PRINTS Disease resistance protein signature 791 807 - -
Vivi1g08059 1239 PANTHER DISEASE RESISTANCE PROTEIN RP 44 861 IPR044974 GO:0006952
Vivi1g08059 1239 Gene3D - 16 130 - -
Vivi1g08059 1239 SMART LRR_typ_2 634 657 IPR003591 -
Vivi1g08059 1239 SMART LRR_typ_2 587 610 IPR003591 -
Vivi1g08059 1239 Gene3D Ribonuclease Inhibitor 1100 1223 IPR032675 -
Vivi1g08059 1239 SUPERFAMILY L domain-like 479 898 - -
Vivi1g08059 1239 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 416 IPR027417 -
Vivi1g08059 1239 Pfam NB-ARC domain 170 385 IPR002182 GO:0043531
Vivi1g08059 1239 Coils Coil 42 62 - -
Vivi1g08059 1239 Gene3D Ribonuclease Inhibitor 550 911 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08059 Vivi-Chr1 225865557 225873575 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08059 186 673 WRKY Transcription Factor Family AT5G45050 23.845 1.89e-12 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08059 - - vvo:131644921 1525.38