Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08058 ATGGCGGTGGTTGCTGTTGGTGAAGCATTTCTCTCCGCTTTCATTGAAGTTGTCATCGACAGGCTTGCTTCTCCTGAGGTTGTTGACTTGATCCGTGGGAAGAAACTTGACGTCAATTTGGTTCAACGGTTGAAGAACACTCTTTACGCTGTTGAAGCCGTGCTTAACGATGCTGAACAGAAGCAGATTCATGACTCTGCTGTTAACAACTGGCTTGATGATCTCAAAGATGCTCTCTATGTTGCTGATGACATTCTCGACCACATCTTCACCAAATCTGCTCTTTCCAAGAAGAACAAGCAGGTGAGTACTGTTGACTACTTTTCTCGCTTTTTCAACTTTGAAGAAAGGGATATGGTTCGTAAGCTGGAAGATATAGTTGCCAGACTTGAATCCATTCTCAAACTTAAAGATATTCTTGGTCTTCAACTTATTGCAACTCATCACTCATCCTGGAGAACTCCATCTACCTCTTTAGAAGACAGATCTGTCATTTTTGGTAGGGATCAAGACAAACAGGCCATACTCAAATTAATCTTACATGATGATGATGATAACACTGGTGTGATCCCCATTGTTGGCATGGGTGGCCTTGGAAAAACAACTTTAGCCCAATTTGTGTACAACCATGACAGTATAAAGAGCAAATTTGATATTCAAGCATGGGTTTGTGTTTCTGATGATTTCGATGTTTTGAAGGTTACAAAGTTCATCGCGGAGGAAGTGGGAAGTGCTTGTAACACAAATAACTTGAATATCCTTCATCGAGATTTGAAGGAAAAGCTGACCGGAAAGAGGTTCTTAATTGTTTTGGATGATGTCTGGACCGAGGATGACGACTCTTGGAATTCTCTTATAAAGCCTCTTCAATATGGAACTATGGGAAGTAAAATTCTTGTAACTACCCGTATTGATAAAGTTGCTTCTATGGTCCAAACAATTCAACCTTACTCTCTTCACCAATTGTCTGACGAAGATTGTTGGTCAGTGTTTGCAAACAATGCTTCCCTTTCTCCAGATGAATCCAGTGAGGATATGGATCTCCAAAACATTGGCAAAGAGATTGTTAGAAAATGTAAGGGATTGCCTTTAGCAGCACAGTCACTTGGGCGCTTGTTGCGAGAAAAACGTGACATCAGGGATTGGAATAGTATACTGAATAATAATATTTGGGAGAATAAGAGTAAGATCATTCCAGCATTGAGAATTAGTTATCATTATCTCCCTCCATATTTAAAGCGTTGCTTTGTATATTGTTCATTGTTTCCCAAAGATTATAAATTTGATAAAGATGAATTGATCTTGTTGTGGATGGCGGAGGATCTTTTACATCCTTCAGAAAATAACAAGACTTTAGAAGAAGTCGGTTATGGGTATTTTAATGACTTAGTTTCCAAATCATTTTTTCAACATTCTGACAATGGGAACTTCAAACAACATTTTGTAATGCATGATCTTGTGCATGATTTGGCAACATGGCTTGGTGGAGAATTCTATTTTAGAACAGAAGTAATTGGGAAAGATACGAAGATTGGTACCAAGACTCGTCATTTGTCATTTTCCAAGTTCAGTGATCCAGTCTCGACAAACTTTGACATTTTCGGCAGTATAAAATGTCTAAGAACAATCTCGCCAATCTATTTATGGAATGATCCATTCAACAAAGAAAAAGCGTCATGCTTCATTTTGTCAAATTTGAAGTACTTGAGAGTTTTGAAATTTGGCAACTTTGAAGGTCTTGATGCATTTCTTGATTCAATAGATGAACTAATCCATTTGCGTTATTTGGATCTCTCTTACACATCTATAAAAATGTTACCTGAATCATTATGTAACCTGTATAATCTACAAACTTTAAAGTTGCACGGTTGTAACAATCTAACAAGGCTTCCCAATGACATGCAAAATCTTGTAAATTTGCGCCATCTGGAAATTTGGGGAACTAATTTAAAAGAGATGCCTAGAGAAATGAGCAAATTGATTAATTTACAACAATTGAGTTGCTTTGTCGTGGGAACGCATGAAGAGAAAGGGATCAAGGAATTGGGAACACTTTCGAATCTTCACGGATTACTTTCAATTATGAAGTTAGAGAACGTGACCAACAGCTTTGAAGCATCACAGGCAAAAATGATGGATAAAAAGTACCTTGATAAATTATCATTTGTATGGTCTGAAGATGCAAAGAACCATTTTACAAGTTCACAAAGTGAGATGGATATACTTGGAAAGTTACAACCTTCCAAGAACCTGAAAATGCTAGTTATTGATGGGTACAGGGGCACACTATTTCCAGAATGGGTTGGACATTCTTCCTACCAAAATTTGACTCAGGTATCTTTGTATGGTTGTTTGAATTGTTGTATCCTTCCATCACTCGGACAATTATACTCTCTCAAGGACTTGACACTCAGTGAAATGAATATGCTGGAGACTATTGGAACTGAATATGAGGATACCTTTTCAGGGACATACTTTCCTTCCCTTGAATGTCTGCAGTTTGTCAAGATGTCATGTTGGAAAGTGTGGCATCATCCCCCCGAGTCAAATGCTTATTTTCCAGTATTGAAGTATATTGAGATTAATGATTGTCCCATATTACATGGGGATTTGCCATCTTATCTTCCTGCTTTGGAAACAATTCATATTGAAGGATGCAACCAGCTTGTTTCTTCTCTCCCAAGGGCTCCTGCCATCCGCAGATTATACATATTTGAAAGCAATAATATAGCCTTGAATGAGCTACCCCTTTCATTGGAAGAGTTAGATGTTGGAGGAAGTGAGGTGACAGAGTCTGTCTTTGAAGCCATTACCATCACCCCACCAATTTCTCTTAAAATATTAGCCATCAAGGATTGTTCTTCTGCGATATCGTTTCCAAGAGATTGTTTACCCTTATCCTTAGAGAGTTTGTCCATCACAAATTCTAATAATCTAGATTTCCCAAAGCAAAATCACGTGCATGAGTCACTTAAGTATCTTCGTATAGATAGGAGTTGTGATACTCTCATAACCCTCCCACTGGATACCATTCCCAACCTTCATCATCTGCATATCCAGAATTGTGAAAACTTAGAATGTCTTTCTGTTTCAAAGTCTCTTCAAAATCTCGTTGAGGTTGAAATTATTGGCTGCCCCAAATTTGTATCATTCCCAAGAGAAGGACTGTCTGCACCCAACTTGACATCATTGTATGTCTCCAACTGTGTCAACTTAAAATCACTGCCTTGTCATATAAATACTCTTCTCCCAAAGTTAGTAAGAGTGAGTATACATGATTGTCCAAAATTGGAGACGTTTCCTGAAGGGGGTATGCCGGCTAGCTTTAGAACAATTTTGATTGGGAATTGCGAAAAATTACTGATGAGCTCATCTCTAACTTCAGTGAACATGCTTACCAGTCTTTCCATTCATGGTCCATGTGATGGTGTCGAGTACTTTCCAAAGAAGGGTTTTGCATTGCTGCCTCCCTCCCTTACCTACCTGCGGATATATAACTGTTCAAGTTTGCACACGTTGGATTGCACGAGGCTTCTCCACCTCACTTCCCTGCAAACATTAACAATTTTATGCTGTCCCAAGCTGGAGAATATAGTGGGAGAAAGGCTGCCTGCTTCTCTAATAGAACTTAAAATCTCTGCATGTCCTTTGCTGAAAGAACAGTGCCGCGTGAAATACCCACAAATTTCCCACATCCCTGGCATTACAGTTGATGGAAAATGGATTTAG 3729 0.3875 MAVVAVGEAFLSAFIEVVIDRLASPEVVDLIRGKKLDVNLVQRLKNTLYAVEAVLNDAEQKQIHDSAVNNWLDDLKDALYVADDILDHIFTKSALSKKNKQVSTVDYFSRFFNFEERDMVRKLEDIVARLESILKLKDILGLQLIATHHSSWRTPSTSLEDRSVIFGRDQDKQAILKLILHDDDDNTGVIPIVGMGGLGKTTLAQFVYNHDSIKSKFDIQAWVCVSDDFDVLKVTKFIAEEVGSACNTNNLNILHRDLKEKLTGKRFLIVLDDVWTEDDDSWNSLIKPLQYGTMGSKILVTTRIDKVASMVQTIQPYSLHQLSDEDCWSVFANNASLSPDESSEDMDLQNIGKEIVRKCKGLPLAAQSLGRLLREKRDIRDWNSILNNNIWENKSKIIPALRISYHYLPPYLKRCFVYCSLFPKDYKFDKDELILLWMAEDLLHPSENNKTLEEVGYGYFNDLVSKSFFQHSDNGNFKQHFVMHDLVHDLATWLGGEFYFRTEVIGKDTKIGTKTRHLSFSKFSDPVSTNFDIFGSIKCLRTISPIYLWNDPFNKEKASCFILSNLKYLRVLKFGNFEGLDAFLDSIDELIHLRYLDLSYTSIKMLPESLCNLYNLQTLKLHGCNNLTRLPNDMQNLVNLRHLEIWGTNLKEMPREMSKLINLQQLSCFVVGTHEEKGIKELGTLSNLHGLLSIMKLENVTNSFEASQAKMMDKKYLDKLSFVWSEDAKNHFTSSQSEMDILGKLQPSKNLKMLVIDGYRGTLFPEWVGHSSYQNLTQVSLYGCLNCCILPSLGQLYSLKDLTLSEMNMLETIGTEYEDTFSGTYFPSLECLQFVKMSCWKVWHHPPESNAYFPVLKYIEINDCPILHGDLPSYLPALETIHIEGCNQLVSSLPRAPAIRRLYIFESNNIALNELPLSLEELDVGGSEVTESVFEAITITPPISLKILAIKDCSSAISFPRDCLPLSLESLSITNSNNLDFPKQNHVHESLKYLRIDRSCDTLITLPLDTIPNLHHLHIQNCENLECLSVSKSLQNLVEVEIIGCPKFVSFPREGLSAPNLTSLYVSNCVNLKSLPCHINTLLPKLVRVSIHDCPKLETFPEGGMPASFRTILIGNCEKLLMSSSLTSVNMLTSLSIHGPCDGVEYFPKKGFALLPPSLTYLRIYNCSSLHTLDCTRLLHLTSLQTLTILCCPKLENIVGERLPASLIELKISACPLLKEQCRVKYPQISHIPGITVDGKWI 1242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08058 1242 Gene3D - 15 129 - -
Vivi1g08058 1242 Gene3D Ribonuclease Inhibitor 915 1098 IPR032675 -
Vivi1g08058 1242 FunFam Probable disease resistance protein At1g61300 150 315 - -
Vivi1g08058 1242 Pfam NB-ARC domain 169 388 IPR002182 GO:0043531
Vivi1g08058 1242 SUPERFAMILY L domain-like 482 899 - -
Vivi1g08058 1242 Gene3D - 404 492 IPR036388 -
Vivi1g08058 1242 FunFam Probable disease resistance protein At1g63360 405 493 - -
Vivi1g08058 1242 Coils Coil 41 61 - -
Vivi1g08058 1242 Gene3D - 321 403 IPR042197 -
Vivi1g08058 1242 Gene3D Ribonuclease Inhibitor 1104 1228 IPR032675 -
Vivi1g08058 1242 PANTHER DISEASE RESISTANCE PROTEIN RP 43 864 IPR044974 GO:0006952
Vivi1g08058 1242 Gene3D - 149 315 IPR027417 -
Vivi1g08058 1242 PRINTS Disease resistance protein signature 611 627 - -
Vivi1g08058 1242 PRINTS Disease resistance protein signature 359 373 - -
Vivi1g08058 1242 PRINTS Disease resistance protein signature 189 204 - -
Vivi1g08058 1242 PRINTS Disease resistance protein signature 261 275 - -
Vivi1g08058 1242 SUPERFAMILY L domain-like 889 1220 - -
Vivi1g08058 1242 SMART LRR_typ_2 590 613 IPR003591 -
Vivi1g08058 1242 SMART LRR_typ_2 637 660 IPR003591 -
Vivi1g08058 1242 Pfam Rx N-terminal domain 10 101 IPR041118 -
Vivi1g08058 1242 Gene3D Ribonuclease Inhibitor 551 914 IPR032675 -
Vivi1g08058 1242 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 419 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08058 Vivi-Chr1 225847591 225854630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08058 190 926 WRKY Transcription Factor Family AT5G45050 21.867 1.07e-10 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08058 - - vvo:131644921 1547.72