Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08057 ATGCTCGTGCTCATGCTCTGCTTCTCAGCATTTCTCTCCGCTTTCATTGAAGTTGTCATCGACAGGCTTGCTTCTCCTGAGGTTGTTGACTTGATCCGTGGGAAGAAACTTGACGTCAATTTGGTTCAACGGTTGAAGAACACTCTTTACGCTGTTGAAGCCGTGCTTAACGATGCTGAACAGAAGCAGATTCATGACTCTGCTGTTAACAACTGGCTTGATGATCTCAAAGATGCTCTCTATGTTGCTGATGACATTCTCGACCACATCTTCACCAAATCTGCTCTTTCCAAGAAGAACAAGCAGGTGAGTACTGTTGACTACTTTTCTCGCTTTTTCAACTTTGAAGAAAGGGATATGGTTCGTAAGCTGGAAGATATAGTTGCCAGACTTGAATCCATTCTCAAACTTAAAGATATTCTTGGTCTTCAACTTATTGCAACTCATCACTCATCCTGGAGAACTCCATCTACCTCTTTAGAAGACAGATCTGTCATTTTTGGTAGGGATCAAGACAAACAGGCCATACTCAAATTAATCTTACATGATGATGATGATAACACTGGTGTGATCCCCATTGTTGGCATGGGTGGCCTTGGAAAAACAACTTTAGCCCAATTTGTGTACAACCATGACAGTATAAAGAGCAAATTTGATATTCAAGCATGGGTTTGTGTTTCTGATGATTTCGATGTTTTGAAGGTTACAAAGTTCATCGCGGAGGAAGTGGGAAGTGCTTGTAACACAAATAACTTGAATATCCTTCATCGAGATTTGAAGGAAAAGCTGACCGGAAAGAGGTTCTTAATTGTTTTGGATGATGTCTGGACCGAGGATGACGACTCTTGGAATTCTCTTATAAAGCCTCTTCAATATGGAACTATGGGAAGTAAAATTCTTGTAACTACCCGTATTGATAAAGTTGCTTCTATGGTCCAAACAATTCAACCTTACTCTCTTCACCAATTGTCTGACGAAGATTGTTGGTCAGTGTTTGCAAACAATGCTTCCCTTTCTCCAGATGAATCCAGTGAGGATATGGATCTCCAAAACATTGGCAAAGAGATTGTTAGAAAATGTAAGGGATTGCCTTTAGCAGCACAGTCACTTGGGCGCTTGTTGCGAGAAAAACGTGACATCAGGGATTGGAATAGTATACTGAATAATAATATTTGGGAGAATAAGAGTAAGATCATTCCAGCATTGAGAATTAGTTATCATTATCTCCCTCCATATTTAAAGCGTTGCTTTGTATATTGTTCATTGTTTCCCAAAGATTATAAATTTGATAAAGATGAATTGATCTTGTTGTGGATGGCGGAGGATCTTTTACATCCTTCAGAAAATAACAAGACTTTAGAAGAAGTCGGTTATGGGTATTTTAATGACTTAGTTTCCAAATCATTTTTTCAACATTCTGACAATGGGAACTTCAAACAACATTTTGTAATGCATGATCTTGTGCATGATTTGGCAACATGGCTTGGTGGAGAATTCTATTTTAGAACAGAAGTAATTGGGAAAGATACGAAGATTGGTACCAAGACTCGTCATTTGTCATTTTCCAAGTTCAGTGATCCAGTCTCGACAAACTTTGACATTTTCGGCAGTATAAAATGTCTAAGAACAATCTCGCCAATCTATTTATGGAATGATCCATTCAACAAAGAAAAAGCGTCATGCTTCATTTTGTCAAATTTGAAGTACTTGAGAGTTTTGAAATTTGGCAACTTTGAAGGTCTTGATGCATTTCTTGATTCAATAGATGAACTAATCCATTTGCGTTATTTGGATCTCTCTTACACATCTATAAAAATGTTACCTGAATCATTATGTAACCTGTATAATCTACAAACTTTAAAGTTGCACGGTTGTAACAATCTAACAAGGCTTCCCAATGACATGCAAAATCTTGTAAATTTGCGCCATCTGGAAATTTGGGGAACTAATTTAAAAGAGATGCCTAGAGAAATGAGCAAATTGATTAATTTACAACAATTGAGTTGCTTTGTCGTGGGAACGCATGAAGAGAAAGGGATCAAGGAATTGGGAACACTTTCGAATCTTCACGGATTACTTTCAATTATGAAGTTAGAGAACGTGACCAACAGCTTTGAAGCATCACAGGCAAAAATGATGGATAAAAAGTACCTTGATAAATTATCATTTGTATGGTCTGAAGATGCAAAGAACCATTTTACAAGTTCACAAAGTGAGATGGATATACTTGGAAAGTTACAACCTTCCAAGAACCTGAAAATGCTAGTTATTGATGGGTACAGGGGCACACTATTTCCAGAATGGGTTGGACATTCTTCCTACCAAAATTTGACTCAGGTATCTTTGTATGGTTGTTTGAATTGTTGTATCCTTCCATCACTCGGACAATTATACTCTCTCAAGGACTTGACACTCAGTGAAATGAATATGCTGGAGACTATTGGAACTGAATATGAGGATACCTTTTCAGGGACATACTTTCCTTCCCTTGAATGTCTGCAGTTTGTCAAGATGTCATGTTGGAAAGTGTGGCATCATCCCCCCGAGTCAAATGCTTATTTTCCAGTATTGAAGTATATTGAGATTAATGATTGTCCCATATTACATGGGGATTTGCCATCTTATCTTCCTGCTTTGGAAACAATTCATATTGAAGGATGCAACCAGCTTGTTTCTTCTCTCCCAAGGGCTCCTGCCATCCGCAGATTATACATATTTGAAAGCAATAATATAGCCTTGAATGAGCTACCCCTTTCATTGGAAGAGTTAGATGTTGGAGGAAGTGAGGTGACAGAGTCTGTCTTTGAAGCCATTACCATCACCCCACCAATTTCTCTTAAAATATTAGCCATCAAGGATTGTTCTTCTGCGATATCGTTTCCAAGAGATTGTTTACCCTTATCCTTAGAGAGTTTGTCCATCACAAATTCTAATAATCTAGATTTCCCAAAGCAAAATCACGTGCATGAGTCACTTAAGTATCTTCGTATAGATAGGAGTTGTGATACTCTCATAACCCTCCCACTGGATACCATTCCCAACCTTCATCATCTGCATATCCAGAATTGTGAAAACTTAGAATGTCTTTCTGTTTCAAAGTCTCTTCAAAATCTCGTTGAGGTTGAAATTATTGGCTGCCCCAAATTTGTATCATTCCCAAGAGAAGGACTGTCTGCACCCAACTTGACATCATTGTATGTCTCCAACTGTGTCAACTTAAAATCACTGCCTTGTCATATAAATACTCTTCTCCCAAAGTTAGTAAGAGTGAGTATACATGATTGTCCAAAATTGGAGACGTTTCCTGAAGGGGGTATGCCGGCTAGCTTTAGAACAATTTTGATTGGGAATTGCGAAAAATTACTGATGAGCTCATCTCTAACTTCAGTGAACATGCTTACCAGTCTTTCCATTCATGGTCCATGTGATGGTGTCGAGTACTTTCCAAAGAAGGGTTTTGCATTGCTGCCTCCCTCCCTTACCTACCTGCGGATATATAACTGTTCAAGTTTGCACACGTTGGATTGCACGAGGCTTCTCCACCTCACTTCCCTGCAAACATTAACAATTTTATGCTGTCCCAAGCTGGAGAATATAGTGGGAGAAAGGCTGCCTGCTTCTCTAATAGAACTTAAAATCTCTGCATGTCCTTTGCTGAAAGAACAGTGCCGCGTGAAATACCCACAAATTTCCCACATCCCTGGCATTACAGTTGATGGAAAATGGATTTAG 3732 0.3875 MLVLMLCFSAFLSAFIEVVIDRLASPEVVDLIRGKKLDVNLVQRLKNTLYAVEAVLNDAEQKQIHDSAVNNWLDDLKDALYVADDILDHIFTKSALSKKNKQVSTVDYFSRFFNFEERDMVRKLEDIVARLESILKLKDILGLQLIATHHSSWRTPSTSLEDRSVIFGRDQDKQAILKLILHDDDDNTGVIPIVGMGGLGKTTLAQFVYNHDSIKSKFDIQAWVCVSDDFDVLKVTKFIAEEVGSACNTNNLNILHRDLKEKLTGKRFLIVLDDVWTEDDDSWNSLIKPLQYGTMGSKILVTTRIDKVASMVQTIQPYSLHQLSDEDCWSVFANNASLSPDESSEDMDLQNIGKEIVRKCKGLPLAAQSLGRLLREKRDIRDWNSILNNNIWENKSKIIPALRISYHYLPPYLKRCFVYCSLFPKDYKFDKDELILLWMAEDLLHPSENNKTLEEVGYGYFNDLVSKSFFQHSDNGNFKQHFVMHDLVHDLATWLGGEFYFRTEVIGKDTKIGTKTRHLSFSKFSDPVSTNFDIFGSIKCLRTISPIYLWNDPFNKEKASCFILSNLKYLRVLKFGNFEGLDAFLDSIDELIHLRYLDLSYTSIKMLPESLCNLYNLQTLKLHGCNNLTRLPNDMQNLVNLRHLEIWGTNLKEMPREMSKLINLQQLSCFVVGTHEEKGIKELGTLSNLHGLLSIMKLENVTNSFEASQAKMMDKKYLDKLSFVWSEDAKNHFTSSQSEMDILGKLQPSKNLKMLVIDGYRGTLFPEWVGHSSYQNLTQVSLYGCLNCCILPSLGQLYSLKDLTLSEMNMLETIGTEYEDTFSGTYFPSLECLQFVKMSCWKVWHHPPESNAYFPVLKYIEINDCPILHGDLPSYLPALETIHIEGCNQLVSSLPRAPAIRRLYIFESNNIALNELPLSLEELDVGGSEVTESVFEAITITPPISLKILAIKDCSSAISFPRDCLPLSLESLSITNSNNLDFPKQNHVHESLKYLRIDRSCDTLITLPLDTIPNLHHLHIQNCENLECLSVSKSLQNLVEVEIIGCPKFVSFPREGLSAPNLTSLYVSNCVNLKSLPCHINTLLPKLVRVSIHDCPKLETFPEGGMPASFRTILIGNCEKLLMSSSLTSVNMLTSLSIHGPCDGVEYFPKKGFALLPPSLTYLRIYNCSSLHTLDCTRLLHLTSLQTLTILCCPKLENIVGERLPASLIELKISACPLLKEQCRVKYPQISHIPGITVDGKWI 1243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08057 1243 Gene3D Ribonuclease Inhibitor 916 1099 IPR032675 -
Vivi1g08057 1243 PRINTS Disease resistance protein signature 262 276 - -
Vivi1g08057 1243 PRINTS Disease resistance protein signature 612 628 - -
Vivi1g08057 1243 PRINTS Disease resistance protein signature 190 205 - -
Vivi1g08057 1243 PRINTS Disease resistance protein signature 360 374 - -
Vivi1g08057 1243 Gene3D - 405 493 IPR036388 -
Vivi1g08057 1243 Gene3D - 16 130 - -
Vivi1g08057 1243 SUPERFAMILY L domain-like 896 1221 - -
Vivi1g08057 1243 Pfam Rx N-terminal domain 11 102 IPR041118 -
Vivi1g08057 1243 Gene3D Ribonuclease Inhibitor 1105 1229 IPR032675 -
Vivi1g08057 1243 Gene3D - 322 404 IPR042197 -
Vivi1g08057 1243 Gene3D Ribonuclease Inhibitor 552 915 IPR032675 -
Vivi1g08057 1243 FunFam Probable disease resistance protein At1g61300 151 316 - -
Vivi1g08057 1243 SMART LRR_typ_2 591 614 IPR003591 -
Vivi1g08057 1243 SMART LRR_typ_2 638 661 IPR003591 -
Vivi1g08057 1243 FunFam Probable disease resistance protein At1g63360 406 494 - -
Vivi1g08057 1243 Gene3D - 150 316 IPR027417 -
Vivi1g08057 1243 SUPERFAMILY L domain-like 483 900 - -
Vivi1g08057 1243 PANTHER DISEASE RESISTANCE PROTEIN RP 44 865 IPR044974 GO:0006952
Vivi1g08057 1243 Pfam NB-ARC domain 170 389 IPR002182 GO:0043531
Vivi1g08057 1243 Coils Coil 42 62 - -
Vivi1g08057 1243 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 420 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08057 Vivi-Chr1 225847320 225854631 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08057 191 927 WRKY Transcription Factor Family AT5G45050 21.867 1.59e-10 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08057 - - vvo:131644921 1536.93