Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08010 ATGGGTTCTGGTTTTTGGTTTAAAGCAATAATTAGTTTAAGGAATAGGAAGTCTAGAGATCGAAGATCAAAGAAAGCAAAGGGTACTTTAGCTCAGGAGAAGCTAAGTGCATTGAAGTCGAACAAGTCTCCGGGAAACGAGTCTACTGGTATAGCAAATGGCAACCAAAATGAAAATCTTACGTCCATTGAAGCCACTGCTGCAACAAGGATTCAGACCGCATTCCGGGCTTATAAGGCTAGGAAAGCTTTACGACGATTGAAAGGTTTCACGAAATTGAAGAATTTAACACAAGGTTACTCTATTCAAAAGCAAGCCGGTACAACTTTAACATACCTTCATTCATGGAGCAAAATACAGGGTGAGATTAGAGCTCGTCGAATCTGTATGGTGACAGAAGAAAGGATCAAGCGGAAGAAACAAGAGTCTCAACTAAAACTCGAAGAAAAGCTTCATGATTTCGAGGTTGAATGGTCCGGCGGCCCTGAAACCGCGGAGGAAACCCTTGGTAGGATACATCAGAGAGGAGAAGCAGCAGTAAAGCGCGAAAGAGCCATGGCCTATGCTTTTTCTCATCAGTGGAGAGCAAACTCTAGTCAGAGCCAAGTACTAGGCAGCTACGAGCTCGGCAGAGCTAACTGGGGTTGGAGCTGGAAAGAACGCTGGATCGCCGCTCGTCCATGGGAAAGCCGCGTCGCTACCATTAGCCCGAAGAAAACTCCAAATAAACAGTCCTTCAAGGCTCAAAAGGATAAAAACACATCAACATCTAAAACTCCGGTTTCGGTAACACCTCCTTCCTCCAATACAAAAGGAACTCCTCCTAAAGGGAGTACCAAAGGTAGAAGATTGTCTTTTCCAACCACAGAGAAAGAGAAAACTGTGGTTGAAGGAGTGAAGTGA 903 0.4452 MGSGFWFKAIISLRNRKSRDRRSKKAKGTLAQEKLSALKSNKSPGNESTGIANGNQNENLTSIEATAATRIQTAFRAYKARKALRRLKGFTKLKNLTQGYSIQKQAGTTLTYLHSWSKIQGEIRARRICMVTEERIKRKKQESQLKLEEKLHDFEVEWSGGPETAEETLGRIHQRGEAAVKRERAMAYAFSHQWRANSSQSQVLGSYELGRANWGWSWKERWIAARPWESRVATISPKKTPNKQSFKAQKDKNTSTSKTPVSVTPPSSNTKGTPPKGSTKGRRLSFPTTEKEKTVVEGVK 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08010 300 ProSiteProfiles IQ motif profile. 64 92 IPR000048 GO:0005515
Vivi1g08010 300 MobiDBLite consensus disorder prediction 34 56 - -
Vivi1g08010 300 MobiDBLite consensus disorder prediction 234 300 - -
Vivi1g08010 300 Pfam IQ calmodulin-binding motif 67 85 IPR000048 GO:0005515
Vivi1g08010 300 PANTHER IQ-DOMAIN 5-RELATED 1 273 - -
Vivi1g08010 300 MobiDBLite consensus disorder prediction 285 300 - -
Vivi1g08010 300 MobiDBLite consensus disorder prediction 17 56 - -
Vivi1g08010 300 MobiDBLite consensus disorder prediction 235 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08010 Vivi-Chr1 223604867 223607607 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08010 1 287 IQD Protein Family AT2G33990 52.613 5.08e-86 257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g08010 1 223604867 223607607 Vivi1g08010 1 223604867 223607607 ECH