Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08009 ATGGGTTCTGGTTTTTGGTTTAAAGCAATAATTAGTTTAAGGAATAGGAAGTCTAGAGATCGAAGATCAAAGAAAGCAAAGGGTACTTTAGCTCAGGAGAAGCTAAGTGCATTGAAGTCGAACAAGTCTCCGGGAAACGAGTCTACTGGTATAGCAAATGGCAACCAAAATGAAAATCTTACGTCCATTGAAGCCACTGCTGCAACAAGGATTCAGACCGCATTCCGGGCTTATAAGGCTAGGAAAGCTTTACGACGATTGAAAGGTTTCACGAAATTGAAGAATTTAACACAAGGTTACTCTATTCAAAAGCAAGCCGGTACAACTTTAACATACCTTCATTCATGGAGCAAAATACAGGGTGAGATTAGAGCTCGTCGAATCTGTATGGTGACAGAAGAAAGGATCAAGCGGAAGAAACAAGAGTCTCAACTAAAACTCGAAGAAAAGCTTCATGATTTCGAGGTTGAATGGTCCGGCGGCCCTGAAACCGCGGAGGAAACCCTTGGTAGGATACATCAGAGAGGAGAAGCAGCAGTAAAGCGCGAAAGAGCCATGGCCTATGCTTTTTCTCATCAGTGGAGAGCAAACTCTAGTCAGAGCCAAGTACTAGGCAGCTACGAGCTCGGCAGAGCTAACTGGGGTTGGAGCTGGAAAGAACGCTGGATCGCCGCTCGTCCATGGGAAAGCCGCGTCGCTACCATTAGCCCGAAGAAAACTCCAAATAAACAGTCCTTCAAGGCTCAAAAGGATAAAAACACATCAACATCTAAAACTCCGGTTTCGGTAACACCTCCTTCCTCCAATACAAAAGGAACTCCTCCTAAAGGGAGTACCAAAGGTAGAAGATTGTCTTTTCCAACCACAGAGAAAGAGAAAACTGTGGTTGAAGGAGTGAAGTGA 903 0.4452 MGSGFWFKAIISLRNRKSRDRRSKKAKGTLAQEKLSALKSNKSPGNESTGIANGNQNENLTSIEATAATRIQTAFRAYKARKALRRLKGFTKLKNLTQGYSIQKQAGTTLTYLHSWSKIQGEIRARRICMVTEERIKRKKQESQLKLEEKLHDFEVEWSGGPETAEETLGRIHQRGEAAVKRERAMAYAFSHQWRANSSQSQVLGSYELGRANWGWSWKERWIAARPWESRVATISPKKTPNKQSFKAQKDKNTSTSKTPVSVTPPSSNTKGTPPKGSTKGRRLSFPTTEKEKTVVEGVK 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08009 300 ProSiteProfiles IQ motif profile. 64 92 IPR000048 GO:0005515
Vivi1g08009 300 MobiDBLite consensus disorder prediction 34 56 - -
Vivi1g08009 300 MobiDBLite consensus disorder prediction 234 300 - -
Vivi1g08009 300 Pfam IQ calmodulin-binding motif 67 85 IPR000048 GO:0005515
Vivi1g08009 300 PANTHER IQ-DOMAIN 5-RELATED 1 273 - -
Vivi1g08009 300 MobiDBLite consensus disorder prediction 285 300 - -
Vivi1g08009 300 MobiDBLite consensus disorder prediction 17 56 - -
Vivi1g08009 300 MobiDBLite consensus disorder prediction 235 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08009 Vivi-Chr1 223604867 223607891 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08009 1 287 IQD Protein Family AT2G33990 52.613 5.08e-86 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08009 - - gmx:100786185 395.201