Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07994 ATGATGAGAAACAAAGAACAAACTCTCATCTTCCCTTCTCACACCCCCTTCTCAGAAGACCACACCCTCCCCCTCTCCCACCTCGACACCGATCGTAACCTCCACCTAACCATCCGCTACCTCCGCGCTTACACCGCCACAACCACCACAACAACCATCGCCCACCATAACAACCCCTTCCACGTCATCTCCTCCTCCCTCTCACAAACACTCCCTCACTACTACCCACTCGCCGCCACACTCCGCCACCGCAAACACCCTAACAACCGCCTCGAACTCTTCTGCACCGCCAACCAAGGCATCCCTCTTATCCACACCACCGTAGACTTCACTCTCGACTCCATAAACTACCTCGATGACCCATCTTCGCCTTTCCTCGAACAATTGGTGCCCGACCCGGAACCCGAAGAGGGTATGAATCACCCATGTATGCTTCAGCTAACGGTTTTCAAGTGCGGCGGGTTCACTCTCGGTGCAGCGATTCATCACTCGCTGTGCGACGGGATGGGTGGGACTCTGTTTTTTGTTGGTGATTTTAGTATCATCAATGCATTTTGGTAG 561 0.5365 MMRNKEQTLIFPSHTPFSEDHTLPLSHLDTDRNLHLTIRYLRAYTATTTTTTIAHHNNPFHVISSSLSQTLPHYYPLAATLRHRKHPNNRLELFCTANQGIPLIHTTVDFTLDSINYLDDPSSPFLEQLVPDPEPEEGMNHPCMLQLTVFKCGGFTLGAAIHHSLCDGMGGTLFFVGDFSIINAFW 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07994 186 PANTHER ACYL TRANSFERASE 4 4 175 - -
Vivi1g07994 186 Gene3D - 2 177 IPR023213 -
Vivi1g07994 186 Pfam Transferase family 5 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07994 Vivi-Chr1 223253008 223260065 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07994 61 180 Monolignol Biosynthesis Gene Families AT5G48930 30.328 1.85e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07994 - - vvo:131644903 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g07994 1 223253008 223260065 Vivi1g07994 1 223253008 223260065 ECH