Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07992 ATGAAAGCTGATGACAATGAAGTATCTGATGGAAACACCAAATCTGTATTGAAAGAAGTGAAAGTTGAGGAGGATGAAATAGGGCAAAGCTCAAAGACCCAACCTGCTTCTTTGTTGAATGAATTAGGGCAAACCTCTGGAGCAAACCATGATGCGCTGCTGAAGGATGTGAAAGTGGAGCGTGATGCTGGCCAGCCTTCTCAGGTGAATAACAATGATAAAGTGCTGCAGAAAGAGATATCATGGGAAAAAGAGATCACCAAGTCCCAAATTAGAGGTCATCAAGTGATGCAATTCCCTCAGGAGGTGATAAAGAAAGCTCTAAGACCAGACATAACAGGATGCAGGCTGTATGATCTTGAAGACTTGTCTTTCTATGAGTGTAAGATTCTGAAGTCAAATAGAAAATACGTTGAAATGTATCTTGGATATGGTTGGTATGCATTTGTACAGGACCGAAAGCTGAAGGTCGGTGATAAGGTGGTATTCAACTATAATTCAGACCAGGAAATCTTGTACGCGAGGGTTGAGAGGAAAGTGAAGCAGACCAGCAATTAA 558 0.4158 MKADDNEVSDGNTKSVLKEVKVEEDEIGQSSKTQPASLLNELGQTSGANHDALLKDVKVERDAGQPSQVNNNDKVLQKEISWEKEITKSQIRGHQVMQFPQEVIKKALRPDITGCRLYDLEDLSFYECKILKSNRKYVEMYLGYGWYAFVQDRKLKVGDKVVFNYNSDQEILYARVERKVKQTSN 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07992 185 MobiDBLite consensus disorder prediction 1 36 - -
Vivi1g07992 185 MobiDBLite consensus disorder prediction 1 28 - -
Vivi1g07992 185 Gene3D - 64 178 IPR015300 -
Vivi1g07992 185 ProSiteProfiles B3 DNA-binding domain profile. 82 179 IPR003340 GO:0003677
Vivi1g07992 185 SUPERFAMILY DNA-binding pseudobarrel domain 80 172 IPR015300 -
Vivi1g07992 185 CDD B3_DNA 84 165 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07992 Vivi-Chr1 223177287 223178296 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Vivi1g07992 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07992 - K10605 vvo:131623036 371.703