LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi1g07959	ATGGATGTAGACTACGGAGATATTGATTGTGAAGAATTAGCTAATTGTAATAATGTCGGTGATGAAGAAGGAAAAGAGGACATGGATATTTACAAAAAGATTAATGACCTGACAGATGATGATATAAAATGTTTGGAATTTTCTTCTCAGGAAAAAGCAATAAATTTCTATGAAATATATGCCAAAAGTCACGGGTTTGCAATAAGAAAAGATGATGTAAAACGTGATTATGAAGGGAATATAATTGTTCGTCAATTAGTTTGTAATAGAGAAGGTAAAAGTGATAAGAAGAGGGGACGATGTAGAGATCCAAGACCAACCACACGAATGGAATGTCGTGCTAGGTTTCAAGTAGCTCTAAATCTTGTGACTGAAAAATGGAGAGTTTCCGTATTTGAGCCCTCTCATAACCATGAGTTAACTCCATCACACTATGTTCATTTGATTCCTAAGTATCGTCGATTGACTGAATCGGATAAAGCTCTTGTTGATGGCTTGCACACACATGGTGTTAGAACATGTCATATTTTAGGTTTTATGATGGCTCGAAAAGGTGGTCATAAAGGTCTTGGATTTTGTAAAAAGGACTTATATAACTACTTAAATAATGAAGCAATGGCAAGAATAGAAGGAGGGGATGCTTTTGCTGCTTTGAGTTATTTACAGGCTAAAGCTGATAATGATCCAATGTTTTTTTCGAAGTTTACCACAACAAACGAAGGACGTTTGGAAAACTTATTTTGGTCAGATTCAGCTAGTCGGATTGATTATGAATGTTTTGGTGATGTGATTGCTTTTGACGCGACTTATAAGAAGAACAGGTATGACAAGCCTGTTGTTGTTTTTTCTGGATTCAACCATCATGGAGAAACTACAATTTTCGGTTGTGCTTTGGTTTCTGATGAAAAAATGAGACATACAAGTGGGTTTTAA	933	0.3548	MDVDYGDIDCEELANCNNVGDEEGKEDMDIYKKINDLTDDDIKCLEFSSQEKAINFYEIYAKSHGFAIRKDDVKRDYEGNIIVRQLVCNREGKSDKKRGRCRDPRPTTRMECRARFQVALNLVTEKWRVSVFEPSHNHELTPSHYVHLIPKYRRLTESDKALVDGLHTHGVRTCHILGFMMARKGGHKGLGFCKKDLYNYLNNEAMARIEGGDAFAALSYLQAKADNDPMFFSKFTTTNEGRLENLFWSDSASRIDYECFGDVIAFDATYKKNRYDKPVVVFSGFNHHGETTIFGCALVSDEKMRHTSGF	310

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi1g07959	310	Pfam	FAR1 DNA-binding domain	55	141	IPR004330	-
	Vivi1g07959	310	PANTHER	OS01G0519700 PROTEIN	45	304	-	-
	Vivi1g07959	310	Pfam	MULE transposase domain	263	303	IPR018289	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi1g07959	Vivi-Chr1	221677975	221678907	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Vivi1g07959		FAR1	8.1e-20	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi1g07959	-		-	vvo:131595359	650.203