Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07907 ATGTCAACTCCTTCATCATCTTCTTCTTCTATTTGGATTCTATCTAACATGAAACTTCAATTCTTTACTCGCATCAAACGTTTTCTCCAATCCAAAGCAACCCGAAAGCGCTGCGACACCTCCGATCAGTCTAACAAACAAAAAAATAGAGCTGAACAGAACATAGTTGAAAAGAATGAAACCGTTCAAGTTGTGGAGAAGCATAAGGAGGAGGTGGAGGTGGTGGAGGAAACTGAAATTCTGCTGCAAAAGACAGTGAAAATGCTTCACTTTGGAAGCTGGGAGGAGAAAGAGATTGCTGCAAAAGAGATTGAGAGTTTAGTTAAACAAGATGTCAAAGTTAGAAAGTTGATAACAGAACTTGGAGTGGTGCCGGTTTTGGTATCCATGGTGGCGTCGTCGGTGGTTAGCCGCCGGAGAGCAGGGCTGACGGCGTTGATCTTTCTTGCCGATGGAACTTACACGAACAAAGCTATGATAGTGGAGGCAGGAATATTATCCAAACTACCTAAGACAATTGACCTTATAGATAACTCAACCATGAATGAGTTTGCAGAGTTAGTTCTATCATTATCATCACTTGCAAACACACAATTCCCTTTTCCTTCATTAGATTTTCTACCATTTCTCAAAGACATTCTTAAAAAAGACACAAACTTTGACACCAAAAGATCATGTTTAGGAGCCTTATACAACATATCAACAATGTTAGAAAATGGAAGCACTTTGGTTTCTTATGGTATTGTCCCAATTTTATTGGAACTTTCCTTAGTGAAAGAAATTTCGGAAAAGGCACTTGCTACTTTAGGTAACTTGTTGGTTACTCTAATGGGAAAAAAGGCGATAGAGGAAAGCTCAATGGTGCCACAAAATTTTGTCGAGATTTTGTCGTGGGAAGACAAACCGAAATGTCAAGAGTTATCGGTTTATATTTTGATGATTTTGGCACATCAAAGTTTGGATCAAAGAGAGAAAATGGCACAAGCTAGGGTTGTTCCTATGCTTCTTGAAGTTGTTTTGTTGGGGAGTCCTTTAGCTCAAAAGAGAGCAATGAAGCTATTGCAATGGTTTAAGAATGAGAGGCAAGTTAAGATGGAGCCACATTCTGGTCCTCAAACACCAAGATTTGCAATGGGATCACCTTTGAATCAAAGAGATAGTAAAGAAGGGAAGAATTTGATGAAGAGTTTGGTGAAACAAAGTTTGCATAAGAATTTGGAAATAATAACTCAAAGGGCGAATTTAAATGGAGAGTACTCGAAACTTAAGTCGTTCGTTGTCAGCACAAGTTCCAAGAGTCTGCCTTATTGA 1311 0.3898 MSTPSSSSSSIWILSNMKLQFFTRIKRFLQSKATRKRCDTSDQSNKQKNRAEQNIVEKNETVQVVEKHKEEVEVVEETEILLQKTVKMLHFGSWEEKEIAAKEIESLVKQDVKVRKLITELGVVPVLVSMVASSVVSRRRAGLTALIFLADGTYTNKAMIVEAGILSKLPKTIDLIDNSTMNEFAELVLSLSSLANTQFPFPSLDFLPFLKDILKKDTNFDTKRSCLGALYNISTMLENGSTLVSYGIVPILLELSLVKEISEKALATLGNLLVTLMGKKAIEESSMVPQNFVEILSWEDKPKCQELSVYILMILAHQSLDQREKMAQARVVPMLLEVVLLGSPLAQKRAMKLLQWFKNERQVKMEPHSGPQTPRFAMGSPLNQRDSKEGKNLMKSLVKQSLHKNLEIITQRANLNGEYSKLKSFVVSTSSKSLPY 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07907 436 Gene3D - 53 366 IPR011989 -
Vivi1g07907 436 Coils Coil 41 68 - -
Vivi1g07907 436 SUPERFAMILY ARM repeat 84 358 IPR016024 -
Vivi1g07907 436 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 13 436 - -
Vivi1g07907 436 MobiDBLite consensus disorder prediction 365 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07907 Vivi-Chr1 218789285 218793016 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07907 62 387 U-box Gene Family AT1G67530 26.149 3.56e-19 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07907 - - gmx:100813828 586.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g07907 1 218789285 218793016 Vivi1g07907 1 218789285 218793016 ECH