Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07898 ATGAAGAAGAGTTTCTCAGAATTCTACGAGAAATGGATTTTGAACCTAGAGGAAATTCAGCACCAGCTTCTGAAGGTATCAAAAAGAGAGACGGTGATGAATGAACAAGAGCTACAAACACTGGTTTCAAAAGTCACGGCTCATTTGAAAGAATACTACACTGTGAAATGGAGAGCAGCGCATGAAGATGTTGTTGTTTTCTTTTCACCAACATGGGTTACTCCATTGGAAAACTCATATCTCTGGATAACCGGGTGGAAACCTTCTACTGTCTTTCGCATCCTGGAGAAGTTCGACATGACAGATGAAGAGAAGAAGAAGATAGATGGACTGAGAATGAAGACAAAGATGGAGGAAGAAAAGGTGGAGGGAGAGATGGAGAGGCAGCAAGTGGCTATGGCTGATTTGAAGATGGTGAAGCTGGCGAAAATATCATGCAGAGGTAGGAAAGATGATGCAAGAGTGGATGGGTTGGTTGAAGTGGCTTTGAAAGGAGTGTTTGGTGGTTTGGAGAAAGTAATGAAAAGTTCAGATTGTGTTAGACTTAAGACACTGAAAGGGGTTTTGGATGTTCTTACTCCAATTCAGTCTCTTCATTTTTTGGCTGCACATATTGGTATGCAGTTAAGCTTGAGGCAACTTGGGATCAACAAGATCACTCAGAAAGATCCATAG 675 0.4163 MKKSFSEFYEKWILNLEEIQHQLLKVSKRETVMNEQELQTLVSKVTAHLKEYYTVKWRAAHEDVVVFFSPTWVTPLENSYLWITGWKPSTVFRILEKFDMTDEEKKKIDGLRMKTKMEEEKVEGEMERQQVAMADLKMVKLAKISCRGRKDDARVDGLVEVALKGVFGGLEKVMKSSDCVRLKTLKGVLDVLTPIQSLHFLAAHIGMQLSLRQLGINKITQKDP 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07898 224 ProSiteProfiles DOG1 domain profile. 2 221 IPR025422 GO:0006351|GO:0043565
Vivi1g07898 224 Pfam Seed dormancy control 24 96 IPR025422 GO:0006351|GO:0043565
Vivi1g07898 224 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 4 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07898 Vivi-Chr1 217472576 217473589 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07898 4 203 bZIP Transcription Factor Family AT3G12250 29.557 2.52e-17 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07898 - - vvo:131622563 382.874