Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07894 ATGTCTCTCTCACATCTTGCAATGCGTCAAATACATGCAAATGCATTGCTCATTACTTTCTTTATCTTTCGTGTCTTTCTCTTATCTTTCCATCTGTTCTTTTTCCTTCACCTCCTTTTTCTTTCTTCTCACCATAAAACCACACACTATCCCATACACAACAACAGAAACAAACAACATATGCTAGAAATGAAGAAGAGTTTCTCTGAATTCTACGAGAAATGGATTTCAAAGCTAGAGGAAATTCACCACCAGCTTCTCAAAGCATCAAAAAGAGAGATGGTGATGAATGAACAAGAGCTTCAAGCACTGGTTTCAAAAGTCACTACTCATTTGAAAGAATACTACACTGTGAAATGGAATGCAGCACATGAAGATGTTGTTGTTTTCTTTTCACCAACATGGGTTACTCCATTGGAAAACGCTTCCCTCTGGATAACCGGGTGGAAACCGTCTACAGTCTTTCGCGTCCTCGAGAAGTTTGACATGTCAGATGAAGAGAAGAAGAAGATAGAGGGACTGAAAATGAAGACAAAGATGGAGGAAGAAAAGGTGGAGGGAGAGATGGAGAGGCAGCAAGTGGCTATGGCTGATTTGAAGATGGTGAAGCTGGCGAAAATATCATGCAGAGGTAGGAAAGATGATGCAAGAGTTGATGGGTTGGTTGATGTGGCTTTGAATGGAGTCTTTGGTGGTTTGGAGAAAGTAATGAAAAGCTCTGATTGTGTTAGACTTAAGACAGTTAAAGGGGTTTTGGATGTTCTTAGTCCAATTCAGTCTGTTCATTTTTTGGCAGCACATATTGGTATGCAATTAAGGTTGAGGCAACTTGGGATGAACAAGATCACTCAGAAGGATCCATAG 864 0.4028 MSLSHLAMRQIHANALLITFFIFRVFLLSFHLFFFLHLLFLSSHHKTTHYPIHNNRNKQHMLEMKKSFSEFYEKWISKLEEIHHQLLKASKREMVMNEQELQALVSKVTTHLKEYYTVKWNAAHEDVVVFFSPTWVTPLENASLWITGWKPSTVFRVLEKFDMSDEEKKKIEGLKMKTKMEEEKVEGEMERQQVAMADLKMVKLAKISCRGRKDDARVDGLVDVALNGVFGGLEKVMKSSDCVRLKTVKGVLDVLSPIQSVHFLAAHIGMQLRLRQLGMNKITQKDP 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07894 287 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 67 282 - -
Vivi1g07894 287 ProSiteProfiles DOG1 domain profile. 65 284 IPR025422 GO:0006351|GO:0043565
Vivi1g07894 287 Pfam Seed dormancy control 85 159 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07894 Vivi-Chr1 217425475 217426663 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07894 98 277 bZIP Transcription Factor Family AT5G06960 28.022 2.35e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07894 - - vvo:131622563 379.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g07894 1 217425475 217426663 Vivi1g07894 1 217425475 217426663 ECH