Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07876 ATGTTCTTCAGAGATGCTGATAAAAGAGGAGTTGTTGATGTTAAGTTAACACTCATAACCGTTACTTCTCCTTGGAAAACTATTAGCTACAAAAACCTTACTTTAATCAAAGTTGAAAGCATCTCAGATGGATACGATGAAAGAGGATTATCAGCAACAGAAAGCTTAGATATTTACAAAGAAACCTTTTGGAGAGTTGGATCAAAATCATTTTTCGAGCTTCTCCAAAAATTGTCCACCTCAGAAACTCCACCAAGTTGTGTTATCTTTGATGTTTTTTTTTTGCCTTGGACTCTTGATGTTGGTCAAAGCTTTGGGTTATTCGGAGTATGGCTGAAATCGGAAAGCTTTAATGATTACGGTTTTGACGCAGAAAATGGTTCTCTAAAAGGTGTTGTCAACAAGGTTTTCTTCAGATCAGCTAGAGAGAGTGATGGACATGGAACACACACAGTTTCCACCATTGTAGGATTCATTGTTGCTAATGCTAGCTTATTCGGCATTGCCAAAGGAACAGCTAGAGGTGGTGCTCCAAGTACAAGGCGTGCTATCTACAAGGCCTATGATGCCATTCATGATGGTGTTGACATACTTTCCCTCTCCTTTGGTCCTAATCCTCCGCAGCCGAATTACTTCGAGGACGCGGTCAGTATTGGAACATTCCATGCTTTTCAAAAGGAGATTCTTGTTTCTGCTTCTGCTGGAAACTCCGTGTTTCCTCGAACGGCTTGCAATGTTGCTCCTTGGATCCTTATCGTTTCCGCTAGCACTGCAACTAGAGTTTCTGGAGTTCCAGCAACAAACGCTAGCCTCTGCAATAACAATACTCTAGATCCTACCTTAATCAATGGAAAAATTGTTATTTGCACAATTGAAACATTCGTTGACAATAGAGAAGAAAAATCCATACTACTAAAGCAAGGTGGTGGTGTTGGAATGATACTTATCGACCATAATGCCAAAGAAGTTGGTTTTCAGTTTGTTATCCCAACCACTATTATTGGACATGATGTTGTAGAAGAGCTTCAAGCATACATAAACACAGATAAGAACCCCATTTCTAAAATCATCCCAACAATAATTGTTGTTGGTACCAAACCTACTCCAGAAGTAGCAGCTTTCTCTTCCATGGGGACAAATATAATAACACCGGATATTATCAAGCCTGTTATCACATGA 1179 0.3961 MFFRDADKRGVVDVKLTLITVTSPWKTISYKNLTLIKVESISDGYDERGLSATESLDIYKETFWRVGSKSFFELLQKLSTSETPPSCVIFDVFFLPWTLDVGQSFGLFGVWLKSESFNDYGFDAENGSLKGVVNKVFFRSARESDGHGTHTVSTIVGFIVANASLFGIAKGTARGGAPSTRRAIYKAYDAIHDGVDILSLSFGPNPPQPNYFEDAVSIGTFHAFQKEILVSASAGNSVFPRTACNVAPWILIVSASTATRVSGVPATNASLCNNNTLDPTLINGKIVICTIETFVDNREEKSILLKQGGGVGMILIDHNAKEVGFQFVIPTTIIGHDVVEELQAYINTDKNPISKIIPTIIVVGTKPTPEVAAFSSMGTNIITPDIIKPVIT 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07876 392 Pfam Subtilase family 139 388 IPR000209 GO:0006508|GO:0008236
Vivi1g07876 392 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 109 392 IPR045051 -
Vivi1g07876 392 SUPERFAMILY Subtilisin-like 119 387 IPR036852 GO:0004252|GO:0006508
Vivi1g07876 392 Gene3D - 263 363 - -
Vivi1g07876 392 ProSiteProfiles Serine proteases, subtilase domain profile. 1 392 - -
Vivi1g07876 392 Gene3D Peptidase S8/S53 domain 138 258 IPR036852 GO:0004252|GO:0006508
Vivi1g07876 392 Gene3D Peptidase S8/S53 domain 364 392 IPR036852 GO:0004252|GO:0006508
Vivi1g07876 392 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 30 113 - -
Vivi1g07876 392 CDD PA_subtilisin_like 261 356 - -
Vivi1g07876 392 Gene3D Glycogen Phosphorylase B; 8 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07876 Vivi-Chr1 216546732 216548171 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07876 109 389 Subtilisin-like Serine Gene Family AT5G67360 36.685 3.83e-51 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07876 - - vvo:131594861 781.941