Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07867 ATGGCCAAACTATGTTCTCTTCTCTTTTTTCTCTCACTCTCACTAAATTTCCACTTCTTCATTTCTTCAGCTAAGACTAGAAAAAACATCACCACTGATGAATCATCACTTCTTGCATTCAAATCATCCATTACTTTAGACCCTAATAATCCTATGGTTCATAACTGGTCAACATCCTCTTCTTTATGCACTTGGGTTGGTGTCATATGTGATGAACACCATGGTAGAGTCCATACTTTGAATCTTAGTAAGATGAGACTTAAAGGGACTATTTCACCACAACTTGGAAACCTCTCGTTCCTTGTTAACCTTAATCTTCAAGACAATGGTTTCACTGGTGAATTGCCACAATCGTTGTTTCGGTTGCACCGGTTGAAGTTTCTTGATCTGAGTTATAATTTCATCCAAGGCAATCTTCCATCAAATATTTGCAAAAGGCTTCTAAAAGTTACAATGCTTGATCTTTCTCATAATAAATTTTCCGGTGACATGCCTACTGTTTGGCATCAATGTGAAAATTTGGAAAGTTTATCATTATCCTTCAATGGTTTCAACAAAGGCCCAATGCCACAAGACTTGGGAAACTTGAGCAAGCTTCATTACTTAGACCTTAGCAGCAACAACTTGGAGGGTGAGAAAGGCCCAATGTCACAAGACATGGGAAACTTGAGCAAGCTTCATTACTTAGACCTTAGCAGCAACAACTTGGAGGGCAATCTTCCTTCAAACATTTGCAAAAGGCTTCTAAAAGTTATAGTGCTTGATCTTTCTGATAATGAATTTTCTGGTGATATGCCTACTGTTTGGCATCAATGTGAAAATTTGGAAAGTTTATCATTATCCTTCAATGGTTTCAACAAAGGCCCAATTCCACAAGACATGGGAAACTTGAGCAAGCTTCAGTATTTAGATCTTAGCAGCAACAACTTGGAGGGTTCAATACCAGAGGAGATTGGCCATCTTGATAAACTCAATAACCTAAAATTGACAAACAATGGCTTGACTGGACCTATTGCTTTGAAACTCTTCAACATTTCATCATTGAGGTACTTGTATCTTGGAAACAATTCTCTCTCAGGCGTTCTTCCGTCGGACATGGGCCGTGGCTTACCGAATTTGGAAGATCTACAAATGTCTGGAAACATGTTTGCTGGAAACCTTCCACATGGTTTAGCCAATGCTTCTAAGCTCACTGAAATAGACTTTAGGAAAAATGAATTCAGTGGAATGATACCAAATGTCTTTGGTGGTTTAAAACTCCTTGAATGTCTCCACATAGATGACAATCATAATTTGAAACTAGATGATTCCTTTGGTTTCAACTTCCTCACTTCACTCACAGATTGTAGACATTTGAAATATTTCTCTGCACAAAGAACTAGATTTTCCAAACTCCCCAAGTCAATTGGAAACTTAACTGTGCAATATTTTTGGGCAGATTCTTCGAGAATCGGTGGTAATATTCCATTGGAAATCGGAAATATGAGCAACCTGATTCGGTTATCTCTTACGATGAATGATTTCAATGGACCGATTCCGCATACAATTAGAGGGTTACATAACCTTCAGTCTTTGAATCTCGACAATAATGGACTACAAGGATCCATTGGTGATGAGGTTTGTGAACTTAGGAGTTTGAATACCTTTCATCTATCAAACAATAAGCTTTCTGGAGTGTTGCCTTCATGCTTGGGAAATATGACTTCTCTTAGATATATTCACATAGCATCTAATAGCTTGATCTCGAAGATACCTTCCTCTTTTTGGAGTCTCACAGATCTCTTGGAGGTAGACTTATCCTCCAATGCTTTCGATGGAAGTCTTCCACTGGAAATCGGTAAATGGAGAGCAATTACACTATTAGATTTGTCGGGAAATCAAATTTCAAGCAACATTCCTGATATCATAGGTTCATTACAAAGTTTGCAGATTCTCTCCCTGGCAAATAACAAGTTGTATGGAACGATTCCCACATCAGTTGGTGGAATGTTTAGTTTGAAATTCTTGGATTTGTCGCGAAATCTTCTTACTGGTGTGATTCCAAAATCGTTAGAGTCACTTTCCCGTCTTAAAAGTATCAACTTTTCATACAATATGTTACAAGGAGAGATTCCTGATGACGGACAGTTCAAAAATTTCACAGCTCAATCTTTCATGCATAATGAAGGGCTTTGCGGTAACCCTCGCCTACAAGTACGTTCATGTGATAAACATGTTAGGAGAAGGTCGATCGCGAAGATGTTATTAATCAAATGCATGTTGCCTATAATTGTGTCTGCAATTTTGGTTGCTGGATGTATAATACTTGTACTACGTAAAAGGAAAAATGTTGAAAATCGGCTTGGAAAAGATTTATCGACTATAGGTGCTCATAGAAGGTTTTCCTATTACGAACTTGTGCAAGCAACTAACGGATTCAGCGAAAGTAACTTACTTGGAAAAGGAAGCTTTGGATCTGTGTATCAAGGGATGCTTTCTAGTGGGGAGATAGTTGCAGTTAAAGTTATTGATTTAAACTTTGAAGCAACATCAAAGAGTTTTGATGTAGAATGCAATGCAATGCGCAATCTACGACATCGGAATCTTGTTGAGATTATTAGTAGTTGTTCGAATGTTAATTTCAAATCCTTGGTGATGAAGTTTATGCCAAACGGAAGCGTGGAAAAATGGTTATACTCATATAACTATTGTTTAGATTTCTTGCAAAGGTTGAACATAATGATCGATGTTGCTTCTGCACTGGAGTATCTTCATCACGGTTCTTCAATACCAGTGGTTCATTGTGATCTGAAACCTAGTAATGTTTTACTAGACAGACACATGGTTGCACATGTTAGCGATTTCGGCATTGCCAAGCTCTTGGATGATGGTCAATCCGAAATTCATACCGAGACTTTAGCTACTCTAGGCTATGTTGCACCAGAGTATGGTTCTAAGGGTGTTGTTTCTGTTAAAGGGGATGTATACAGCTTTGGAATTATGCTTATGGAGATGTTTACAAGAAAGAGACCAACAGATGAAATGTTTACAGAAGAATTAACTTTGAAAACATGGATCAGTGGATCAATGCCAAATTCAGTTATGGAAGTTGTGGATTCAAATTTGGTACAGCAACATGAAAAAACAATTCATGACATTGTGTTTCATATATCATCTATTTTCGCTTTGAGCTTGAGTTGTTGCGCAGATTCACCCGAGGAGCGAAATAACATGACAGATATCACTGCATCATTGATCAAAATCAAGACCTTATTCCTCCAAGAAAAAGGAATTGAAGATGTGTAA 3285 0.3775 MAKLCSLLFFLSLSLNFHFFISSAKTRKNITTDESSLLAFKSSITLDPNNPMVHNWSTSSSLCTWVGVICDEHHGRVHTLNLSKMRLKGTISPQLGNLSFLVNLNLQDNGFTGELPQSLFRLHRLKFLDLSYNFIQGNLPSNICKRLLKVTMLDLSHNKFSGDMPTVWHQCENLESLSLSFNGFNKGPMPQDLGNLSKLHYLDLSSNNLEGEKGPMSQDMGNLSKLHYLDLSSNNLEGNLPSNICKRLLKVIVLDLSDNEFSGDMPTVWHQCENLESLSLSFNGFNKGPIPQDMGNLSKLQYLDLSSNNLEGSIPEEIGHLDKLNNLKLTNNGLTGPIALKLFNISSLRYLYLGNNSLSGVLPSDMGRGLPNLEDLQMSGNMFAGNLPHGLANASKLTEIDFRKNEFSGMIPNVFGGLKLLECLHIDDNHNLKLDDSFGFNFLTSLTDCRHLKYFSAQRTRFSKLPKSIGNLTVQYFWADSSRIGGNIPLEIGNMSNLIRLSLTMNDFNGPIPHTIRGLHNLQSLNLDNNGLQGSIGDEVCELRSLNTFHLSNNKLSGVLPSCLGNMTSLRYIHIASNSLISKIPSSFWSLTDLLEVDLSSNAFDGSLPLEIGKWRAITLLDLSGNQISSNIPDIIGSLQSLQILSLANNKLYGTIPTSVGGMFSLKFLDLSRNLLTGVIPKSLESLSRLKSINFSYNMLQGEIPDDGQFKNFTAQSFMHNEGLCGNPRLQVRSCDKHVRRRSIAKMLLIKCMLPIIVSAILVAGCIILVLRKRKNVENRLGKDLSTIGAHRRFSYYELVQATNGFSESNLLGKGSFGSVYQGMLSSGEIVAVKVIDLNFEATSKSFDVECNAMRNLRHRNLVEIISSCSNVNFKSLVMKFMPNGSVEKWLYSYNYCLDFLQRLNIMIDVASALEYLHHGSSIPVVHCDLKPSNVLLDRHMVAHVSDFGIAKLLDDGQSEIHTETLATLGYVAPEYGSKGVVSVKGDVYSFGIMLMEMFTRKRPTDEMFTEELTLKTWISGSMPNSVMEVVDSNLVQQHEKTIHDIVFHISSIFALSLSCCADSPEERNNMTDITASLIKIKTLFLQEKGIEDV 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07867 1094 SMART LRR_sd22_2 248 277 - -
Vivi1g07867 1094 SMART LRR_sd22_2 147 176 - -
Vivi1g07867 1094 SMART LRR_sd22_2 519 540 - -
Vivi1g07867 1094 SMART LRR_sd22_2 122 145 - -
Vivi1g07867 1094 SMART LRR_sd22_2 196 225 - -
Vivi1g07867 1094 SMART LRR_sd22_2 663 689 - -
Vivi1g07867 1094 SMART LRR_sd22_2 297 320 - -
Vivi1g07867 1094 ProSitePatterns Serine/Threonine protein kinases active-site signature. 925 937 IPR008271 GO:0004672|GO:0006468
Vivi1g07867 1094 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 213 434 - -
Vivi1g07867 1094 Gene3D Ribonuclease Inhibitor 213 433 IPR032675 -
Vivi1g07867 1094 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 445 739 - -
Vivi1g07867 1094 PANTHER OS04G0122200 PROTEIN 319 1085 - -
Vivi1g07867 1094 SUPERFAMILY Protein kinase-like (PK-like) 786 1078 IPR011009 -
Vivi1g07867 1094 FunFam Serine-threonine protein kinase plant-type 786 881 - -
Vivi1g07867 1094 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 882 1090 - -
Vivi1g07867 1094 ProSiteProfiles Protein kinase domain profile. 806 1086 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g07867 1094 Gene3D Transferase(Phosphotransferase) domain 1 882 1089 - -
Vivi1g07867 1094 PRINTS Leucine-rich repeat signature 199 212 - -
Vivi1g07867 1094 PRINTS Leucine-rich repeat signature 297 310 - -
Vivi1g07867 1094 Gene3D Ribonuclease Inhibitor 146 212 IPR032675 -
Vivi1g07867 1094 Gene3D Ribonuclease Inhibitor 32 145 IPR032675 -
Vivi1g07867 1094 SMART LRR_typ_2 223 247 IPR003591 -
Vivi1g07867 1094 SMART LRR_typ_2 639 662 IPR003591 -
Vivi1g07867 1094 SMART LRR_typ_2 591 615 IPR003591 -
Vivi1g07867 1094 SMART LRR_typ_2 345 369 IPR003591 -
Vivi1g07867 1094 SMART LRR_typ_2 519 541 IPR003591 -
Vivi1g07867 1094 SMART LRR_typ_2 370 394 IPR003591 -
Vivi1g07867 1094 SMART LRR_typ_2 663 686 IPR003591 -
Vivi1g07867 1094 SMART LRR_typ_2 543 566 IPR003591 -
Vivi1g07867 1094 SMART LRR_typ_2 297 321 IPR003591 -
Vivi1g07867 1094 SMART LRR_typ_2 122 146 IPR003591 -
Vivi1g07867 1094 SMART LRR_typ_2 687 712 IPR003591 -
Vivi1g07867 1094 SMART LRR_typ_2 567 590 IPR003591 -
Vivi1g07867 1094 SMART LRR_typ_2 147 170 IPR003591 -
Vivi1g07867 1094 FunFam Leucine-rich repeat receptor-like protein kinase 30 188 - -
Vivi1g07867 1094 SUPERFAMILY L domain-like 241 446 - -
Vivi1g07867 1094 SUPERFAMILY L domain-like 449 728 - -
Vivi1g07867 1094 SUPERFAMILY L domain-like 56 316 - -
Vivi1g07867 1094 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Vivi1g07867 1094 SMART serkin_6 806 1085 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g07867 1094 Gene3D Phosphorylase Kinase; domain 1 788 881 - -
Vivi1g07867 1094 Pfam Leucine Rich Repeat 299 321 IPR001611 GO:0005515
Vivi1g07867 1094 ProSiteProfiles Leucine-rich repeat profile. 299 321 IPR001611 GO:0005515
Vivi1g07867 1094 Gene3D Ribonuclease Inhibitor 434 742 IPR032675 -
Vivi1g07867 1094 Pfam Protein kinase domain 807 1075 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g07867 1094 ProSitePatterns Protein kinases ATP-binding region signature. 812 834 IPR017441 GO:0005524
Vivi1g07867 1094 Pfam Leucine rich repeat 618 676 IPR001611 GO:0005515
Vivi1g07867 1094 Pfam Leucine rich repeat 225 284 IPR001611 GO:0005515
Vivi1g07867 1094 Pfam Leucine rich repeat 544 603 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07867 Vivi-Chr1 215751566 215767999 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07867 483 724 Receptor kinase-like Gene Family AT3G47570 31.687 6.20e-24 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Vivi1g07867 Pkinase 6.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07867 - K13420 vvo:131644871 2144.39