Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07865 ATGGCCAAACTATGTTCTCTTCTCTTTTTTCTCTCACTCTCACTAAATTTCCACTTCTTCATTTCTTCAGCTAAGACTAGAAAAAACATCACCACTGATGAATCATCACTTCTTGCATTCAAATCATCCATTACTTTAGACCCTAATAATCCTATGGTTCATAACTGGTCAACATCCTCTTCTTTATGCACTTGGGTTGGTGTCATATGTGATGAACACCATGGTAGAGTCCATACTTTGAATCTTAGTAAGATGAGACTTAAAGGGACTATTTCACCACAACTTGGAAACCTCTCGTTCCTTGTTAACCTTAATCTTCAAGACAATGGTTTCACTGGTGAATTGCCACAATCGTTGTTTCGGTTGCACCGGTTGAAGTTTCTTGATCTGAGTTATAATTTCATCCAAGGCAATCTTCCTTCAAACATTTGCAAAAGGCTTCTAAAAGTTATAGTGCTTGATCTTTCTGATAATGAATTTTCTGGTGATATGCCTACTGTTTGGCATCAATGTGAAAATTTGGAAAGTTTATCATTATCCTTCAATGGTTTCAACAAAGGCCCAATTCCACAAGACATGGGAAACTTGAGCAAGCTTCAGTATTTAGATCTTAGCAGCAACAACTTGGAGGGTTCAATACCAGAGGAGATTGGCCATCTTGATAAACTCAATAACCTAAAATTGACAAACAATGGCTTGACTGGACCTATTGCTTTGAAACTCTTCAACATTTCATCATTGAGGTACTTGTATCTTGGAAACAATTCTCTCTCAGGCGTTCTTCCGTCGGACATGGGCCGTGGCTTACCGAATTTGGAAGATCTACAAATGTCTGGAAACATGTTTGCTGGAAACCTTCCACATGGTTTAGCCAATGCTTCTAAGCTCACTGAAATAGACTTTAGGAAAAATGAATTCAGTGGAATGATACCAAATGTCTTTGGTGGTTTAAAACTCCTTGAATGTCTCCACATAGATGACAATCATAATTTGAAACTAGATGATTCCTTTGGTTTCAACTTCCTCACTTCACTCACAGATTGTAGACATTTGAAATATTTCTCTGCACAAAGAACTAGATTTTCCAAACTCCCCAAGTCAATTGGAAACTTAACTGTGCAATATTTTTGGGCAGATTCTTCGAGAATCGGTGGTAATATTCCATTGGAAATCGGAAATATGAGCAACCTGATTCGGTTATCTCTTACGATGAATGATTTCAATGGACCGATTCCGCATACAATTAGAGGGTTACATAACCTTCAGTCTTTGAATCTCGACAATAATGGACTACAAGGATCCATTGGTGATGAGGTTTGTGAACTTAGGAGTTTGAATACCTTTCATCTATCAAACAATAAGCTTTCTGGAGTGTTGCCTTCATGCTTGGGAAATATGACTTCTCTTAGATATATTCACATAGCATCTAATAGCTTGATCTCGAAGATACCTTCCTCTTTTTGGAGTCTCACAGATCTCTTGGAGGTAGACTTATCCTCCAATGCTTTCGATGGAAGTCTTCCACTGGAAATCGGTAAATGGAGAGCAATTACACTATTAGATTTGTCGGGAAATCAAATTTCAAGCAACATTCCTGATATCATAGGTTCATTACAAAGTTTGCAGATTCTCTCCCTGGCAAATAACAAGTTGTATGGAACGATTCCCACATCAGTTGGTGGAATGTTTAGTTTGAAATTCTTGGATTTGTCGCGAAATCTTCTTACTGGTGTGATTCCAAAATCGTTAGAGTCACTTTCCCGTCTTAAAAGTATCAACTTTTCATACAATATGTTACAAGGAGAGATTCCTGATGACGGACAGTTCAAAAATTTCACAGCTCAATCTTTCATGCATAATGAAGGGCTTTGCGGTAACCCTCGCCTACAAGTACGTTCATGTGATAAACATGTTAGGAGAAGGTCGATCGCGAAGATGTTATTAATCAAATGCATGTTGCCTATAATTGTGTCTGCAATTTTGGTTGCTGGATGTATAATACTTGTACTACGTAAAAGGAAAAATGTTGAAAATCGGCTTGGAAAAGATTTATCGACTATAGGTGCTCATAGAAGGTTTTCCTATTACGAACTTGTGCAAGCAACTAACGGATTCAGCGAAAGTAACTTACTTGGAAAAGGAAGCTTTGGATCTGTGTATCAAGGGATGCTTTCTAGTGGGGAGATAGTTGCAGTTAAAGTTATTGATTTAAACTTTGAAGCAACATCAAAGAGTTTTGATGTAGAATGCAATGCAATGCGCAATCTACGACATCGGAATCTTGTTGAGATTATTAGTAGTTGTTCGAATGTTAATTTCAAATCCTTGGTGATGAAGTTTATGCCAAACGGAAGCGTGGAAAAATGGTTATACTCATATAACTATTGTTTAGATTTCTTGCAAAGGTTGAACATAATGATCGATGTTGCTTCTGCACTGGAGTATCTTCATCACGGTTCTTCAATACCAGTGGTTCATTGTGATCTGAAACCTAGTAATGTTTTACTAGACAGACACATGGTTGCACATGTTAGCGATTTCGGCATTGCCAAGCTCTTGGATGATGGTCAATCCGAAATTCATACCGAGACTTTAGCTACTCTAGGCTATGTTGCACCAGAGTATGGTTCTAAGGGTGTTGTTTCTGTTAAAGGGGATGTATACAGCTTTGGAATTATGCTTATGGAGATGTTTACAAGAAAGAGACCAACAGATGAAATGTTTACAGAAGAATTAACTTTGAAAACATGGATCAGTGGATCAATGCCAAATTCAGTTATGGAAGTTGTGGATTCAAATTTGGTACAGCAACATGAAAAAACAATTCATGACATTGTGTTTCATATATCATCTATTTTCGCTTTGAGCTTGAGTTGTTGCGCAGATTCACCCGAGGAGCGAAATAACATGACAGATATCACTGCATCATTGATCAAAATCAAGACCTTATTCCTCCAAGAAAAAGGAATTGAAGATGTGTAA 2982 0.3756 MAKLCSLLFFLSLSLNFHFFISSAKTRKNITTDESSLLAFKSSITLDPNNPMVHNWSTSSSLCTWVGVICDEHHGRVHTLNLSKMRLKGTISPQLGNLSFLVNLNLQDNGFTGELPQSLFRLHRLKFLDLSYNFIQGNLPSNICKRLLKVIVLDLSDNEFSGDMPTVWHQCENLESLSLSFNGFNKGPIPQDMGNLSKLQYLDLSSNNLEGSIPEEIGHLDKLNNLKLTNNGLTGPIALKLFNISSLRYLYLGNNSLSGVLPSDMGRGLPNLEDLQMSGNMFAGNLPHGLANASKLTEIDFRKNEFSGMIPNVFGGLKLLECLHIDDNHNLKLDDSFGFNFLTSLTDCRHLKYFSAQRTRFSKLPKSIGNLTVQYFWADSSRIGGNIPLEIGNMSNLIRLSLTMNDFNGPIPHTIRGLHNLQSLNLDNNGLQGSIGDEVCELRSLNTFHLSNNKLSGVLPSCLGNMTSLRYIHIASNSLISKIPSSFWSLTDLLEVDLSSNAFDGSLPLEIGKWRAITLLDLSGNQISSNIPDIIGSLQSLQILSLANNKLYGTIPTSVGGMFSLKFLDLSRNLLTGVIPKSLESLSRLKSINFSYNMLQGEIPDDGQFKNFTAQSFMHNEGLCGNPRLQVRSCDKHVRRRSIAKMLLIKCMLPIIVSAILVAGCIILVLRKRKNVENRLGKDLSTIGAHRRFSYYELVQATNGFSESNLLGKGSFGSVYQGMLSSGEIVAVKVIDLNFEATSKSFDVECNAMRNLRHRNLVEIISSCSNVNFKSLVMKFMPNGSVEKWLYSYNYCLDFLQRLNIMIDVASALEYLHHGSSIPVVHCDLKPSNVLLDRHMVAHVSDFGIAKLLDDGQSEIHTETLATLGYVAPEYGSKGVVSVKGDVYSFGIMLMEMFTRKRPTDEMFTEELTLKTWISGSMPNSVMEVVDSNLVQQHEKTIHDIVFHISSIFALSLSCCADSPEERNNMTDITASLIKIKTLFLQEKGIEDV 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07865 993 Gene3D Transferase(Phosphotransferase) domain 1 781 989 - -
Vivi1g07865 993 SMART LRR_typ_2 538 561 IPR003591 -
Vivi1g07865 993 SMART LRR_typ_2 490 514 IPR003591 -
Vivi1g07865 993 SMART LRR_typ_2 244 268 IPR003591 -
Vivi1g07865 993 SMART LRR_typ_2 418 440 IPR003591 -
Vivi1g07865 993 SMART LRR_typ_2 122 146 IPR003591 -
Vivi1g07865 993 SMART LRR_typ_2 269 293 IPR003591 -
Vivi1g07865 993 SMART LRR_typ_2 586 611 IPR003591 -
Vivi1g07865 993 SMART LRR_typ_2 562 585 IPR003591 -
Vivi1g07865 993 SMART LRR_typ_2 466 489 IPR003591 -
Vivi1g07865 993 SMART LRR_typ_2 442 465 IPR003591 -
Vivi1g07865 993 SMART LRR_typ_2 196 220 IPR003591 -
Vivi1g07865 993 Gene3D Ribonuclease Inhibitor 26 90 IPR032675 -
Vivi1g07865 993 Gene3D Ribonuclease Inhibitor 331 641 IPR032675 -
Vivi1g07865 993 Gene3D Ribonuclease Inhibitor 91 330 IPR032675 -
Vivi1g07865 993 SUPERFAMILY L domain-like 347 627 - -
Vivi1g07865 993 ProSiteProfiles Leucine-rich repeat profile. 198 220 IPR001611 GO:0005515
Vivi1g07865 993 ProSiteProfiles Protein kinase domain profile. 705 985 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g07865 993 Pfam Protein kinase domain 706 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g07865 993 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Vivi1g07865 993 PANTHER OS04G0122200 PROTEIN 218 984 - -
Vivi1g07865 993 FunFam Serine-threonine protein kinase plant-type 685 780 - -
Vivi1g07865 993 Pfam Leucine Rich Repeat 198 220 IPR001611 GO:0005515
Vivi1g07865 993 ProSitePatterns Protein kinases ATP-binding region signature. 711 733 IPR017441 GO:0005524
Vivi1g07865 993 Gene3D Phosphorylase Kinase; domain 1 687 780 - -
Vivi1g07865 993 ProSitePatterns Serine/Threonine protein kinases active-site signature. 824 836 IPR008271 GO:0004672|GO:0006468
Vivi1g07865 993 PRINTS Leucine-rich repeat signature 199 212 - -
Vivi1g07865 993 PRINTS Leucine-rich repeat signature 538 551 - -
Vivi1g07865 993 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 149 332 - -
Vivi1g07865 993 FunFam Leucine-rich repeat receptor-like kinase 34 148 - -
Vivi1g07865 993 SUPERFAMILY Protein kinase-like (PK-like) 685 977 IPR011009 -
Vivi1g07865 993 SMART serkin_6 705 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g07865 993 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 344 638 - -
Vivi1g07865 993 SUPERFAMILY L domain-like 33 331 - -
Vivi1g07865 993 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 781 989 - -
Vivi1g07865 993 Pfam Leucine rich repeat 517 575 IPR001611 GO:0005515
Vivi1g07865 993 Pfam Leucine rich repeat 443 502 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07865 Vivi-Chr1 215751566 215767999 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07865 32 986 Receptor kinase-like Gene Family AT3G47570 37.364 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Vivi1g07865 Pkinase 5.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07865 - K13420 vvo:131644871 1714.51