Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07850 ATGATGCAGGTGCCAGCATATATATTTGCTCAATATATTGGATCAATAGCTGGATTTGAAGCTCTCCAATTAATATTTGGTGACAAACCAAATCGTTTTTTGATAATTCTTTCGACTGGTTCTAACCTCCGAGCATTCATTATGGAATTTTTAATCACTTTCTATACTATGCTCATCATTTCTAAAGTCTCCAGCAAAAATAGATTGATTAGTGAATTGGTTGGATTTGCAGTTGGGGCGACAATTATTCTAAGCATGTTATTTGTTGGACCGTTTACAAGAGCAGCTATAAGAGCATCAATGAATCCAACAGAAAGATTAAGCTCAACTATTGTGCACCATGAATATAAAGATTTGGAGTGGCCTATATTAGGAACTTTGGGTGGCTCATTGACGTATACTTTCTTCATACATTCAAGCAAAATGGTACGCAAAATGGTACGTGAGCAAAACAACAATTTTTACCCCCCAAATGTATTCGGATCGTTGGCTTTAAAAATAATGATGTATTAG 513 0.3528 MMQVPAYIFAQYIGSIAGFEALQLIFGDKPNRFLIILSTGSNLRAFIMEFLITFYTMLIISKVSSKNRLISELVGFAVGATIILSMLFVGPFTRAAIRASMNPTERLSSTIVHHEYKDLEWPILGTLGGSLTYTFFIHSSKMVRKMVREQNNNFYPPNVFGSLALKIMMY 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07850 170 Gene3D Glycerol uptake facilitator protein. 1 150 IPR023271 -
Vivi1g07850 170 Pfam Major intrinsic protein 2 130 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi1g07850 170 SUPERFAMILY Aquaporin-like 2 139 IPR023271 -
Vivi1g07850 170 PRINTS Major intrinsic protein family signature 79 101 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi1g07850 170 PRINTS Major intrinsic protein family signature 48 66 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi1g07850 170 PRINTS Major intrinsic protein family signature 116 136 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi1g07850 170 PRINTS Major intrinsic protein family signature 3 22 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi1g07850 170 PANTHER AQUAPORIN NIP2-1 2 141 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07850 Vivi-Chr1 215060624 215062298 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07850 3 151 Major Intrinsic Protein MIP AT5G37810 34.416 1.27e-22 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07850 K09874 - gmx:100812577 127.872