Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07846 ATGGAAGATCCTGTGTCTCTTACGCATAAGTTGGTAGTAGAGATGGTAGGAACATTTTACTTTATGTTCGTAGGATTTGGTATCACATTGACAAATATTCAGAGTGAGAATGGAGTGGCACCTCCTGCAATTGCAATTGTTTGGGGACTTATAGTTGTGGCATTGGTATATTGTCTTGGCCACATCTCTGGTGGTCATTTTAATCCAGTTGTGATAATTACTCAGTCATTAGCCAGAAGAATACCAAAGACGCAGGTGCCAATATATATACTTGCTCAGCACATCGGATCAAAACTCGCATTTGACGCTCTCAAATTTATATTTGGTGAAAAAGAAAGTCGTTTTTTGATAGGTCTTCCGGCTGATTCTAACCTCCAAGCATTTTTAATGGAATTTATAATCACTTTCTTTCTTATGCTCATCCTCTCTAGAGTCTCCACAAGTAATAGAGCGATAGGTGAATTGGTTGGATTTGCAGTTGGAACAACAATCATTCTAAGCATGTTATTTGTTGGACCGTTTACAAGAGCAGCTATAAGAGCATCAATGAATCCAACAGAAAGATTAAGCTCAACTATTGTGCACCATGAATATAAAGATTTGGAGTCACCTATATTAGGAACTTTGGCTGGCTCATTGACGTATACTTTCTTCATATTTACAAACAAGCTTTTCTCAAGCTACTCTTCATGA 693 0.3766 MEDPVSLTHKLVVEMVGTFYFMFVGFGITLTNIQSENGVAPPAIAIVWGLIVVALVYCLGHISGGHFNPVVIITQSLARRIPKTQVPIYILAQHIGSKLAFDALKFIFGEKESRFLIGLPADSNLQAFLMEFIITFFLMLILSRVSTSNRAIGELVGFAVGTTIILSMLFVGPFTRAAIRASMNPTERLSSTIVHHEYKDLESPILGTLAGSLTYTFFIFTNKLFSSYSS 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07846 230 PANTHER AQUAPORIN NIP2-1 5 223 IPR034294 -
Vivi1g07846 230 SUPERFAMILY Aquaporin-like 7 222 IPR023271 -
Vivi1g07846 230 Gene3D Glycerol uptake facilitator protein. 2 226 IPR023271 -
Vivi1g07846 230 PRINTS Major intrinsic protein family signature 161 183 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi1g07846 230 PRINTS Major intrinsic protein family signature 130 148 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi1g07846 230 PRINTS Major intrinsic protein family signature 9 28 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi1g07846 230 PRINTS Major intrinsic protein family signature 85 104 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi1g07846 230 PRINTS Major intrinsic protein family signature 198 218 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi1g07846 230 PRINTS Major intrinsic protein family signature 48 72 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi1g07846 230 Pfam Major intrinsic protein 6 215 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07846 Vivi-Chr1 214691524 214693107 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07846 5 223 Major Intrinsic Protein MIP AT5G37820 43.498 1.23e-55 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07846 K09874 - gmx:100812577 217.624