Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07823 ATGAAGAGTTGTGAAGAATGGAAACCTTTTATGATAATGATAGCAATTGATGTTTCTTTTGCTATTGTGAATATTCTTCTCAAGAAAGTCCTTGAAGAAGGAATGAACCATTTGGTTTTTATCACGTATCGTCTCTCGATTGCTACCGTTTTTGTCGGCTCCATCGGTTACTTTAAGGAAAGAAATAGCAGACCGCGCCTCACATTTCGAATTTTATGCTACCTCTTCTTCAGTGCCATTGTTGGAGCATCAGTCACACAATTCTTCTTCCTCCTGGGAATCCAATATACTTCCGCTACATTTGCTTGTGCTTTTCTCAACATGGTGCCGGTGGTCACATTCCTATTGGCATTGCCATTCGGATTAGAGACTGTGAACATCAAATGCAACAGTGGAAGAGCCAAGATTCTTGGCACATTGGTGTGTATAGTTGGAGCATTGATGTTGACACTTTTCAAAGGAAAGGGACTGTTTAACTTTTCGCACTCGCAGTCATCGGTGAAGTTAGCATCTACAAGAACACCAGAGAAATGGACTATTGGTGTCATAGCTTTGATTTTGGGAACACTCTTTTGGTCTTCTTGGTACATTTTACAATCTAAAATAAGTAAAAGATATCCATGCCAGTATTCTAGCACCGCGATCATGAGCTTCTTCGGAGCCATTCAATCCGCTGTCATTTGCTTGTTCATTGATCATGACTTGTCTATTTGGGCTCTCCGAGGAAAGATACAAATAATCGCTATTTTGTATGCTGGAATAATTGGATCGGGTTTGTGTTTTGTTGGCATGTCATGGTGTGTCAAGAAGAGAGGTCCGGTCTTTACGGCCGCATTCAGTCCGTTTGTTCAGATAATGGCAGCCATGATTGATATTCCTGTCTTGCATGAACAACTCTATCTTGGAAGTATGGTGGGATCAATCTTGGTGATGATTGGACTATACATTCTTCTATGGGGTAAGAGCAAGGAAGCGCAGAAGCGGTTGATTAAGCTAGCAGAAGAAGCTGAAAAGACCAAAGAACAAGAGCCACAACAACCTCAAATACAACTCTTAACAGTGTCTTGTGACTCACGGTAG 1080 0.413 MKSCEEWKPFMIMIAIDVSFAIVNILLKKVLEEGMNHLVFITYRLSIATVFVGSIGYFKERNSRPRLTFRILCYLFFSAIVGASVTQFFFLLGIQYTSATFACAFLNMVPVVTFLLALPFGLETVNIKCNSGRAKILGTLVCIVGALMLTLFKGKGLFNFSHSQSSVKLASTRTPEKWTIGVIALILGTLFWSSWYILQSKISKRYPCQYSSTAIMSFFGAIQSAVICLFIDHDLSIWALRGKIQIIAILYAGIIGSGLCFVGMSWCVKKRGPVFTAAFSPFVQIMAAMIDIPVLHEQLYLGSMVGSILVMIGLYILLWGKSKEAQKRLIKLAEEAEKTKEQEPQQPQIQLLTVSCDSR 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07823 359 Coils Coil 322 343 - -
Vivi1g07823 359 PANTHER WAT1-RELATED PROTEIN 8 335 IPR030184 GO:0016020|GO:0022857
Vivi1g07823 359 Pfam EamA-like transporter family 180 318 IPR000620 GO:0016020
Vivi1g07823 359 Pfam EamA-like transporter family 11 150 IPR000620 GO:0016020
Vivi1g07823 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 323 - -
Vivi1g07823 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07823 Vivi-Chr1 213271959 213274561 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07823 7 252 Nodulin-like Gene Family AT3G30340 50.000 4.45e-88 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07823 - - gmx:100803670 573.933