Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07814 ATGTCAAGGGCTCCTATATTGATCAAGGACTTGGTGAAAGGAAACCAAGTTTGGAAGATGCAAATAAGGGTTGTTGATTTGTGGGTCGTTAAGGAGAAATCAGGGCATAAACACCTCGAGTTGGTCATTCAAGATGTGAAGGGTGATCAAATTCACGTCACCACCCGGAGCCGAGATTTCAAGGATTGGCATGATCAGGTCAAAGAACATGAAACATATACACTATATAATGGAGAGCCGGTTGTTAATGATGGAGCCTTAAAAGTTTGTTCTAACCCACTCAAGATTGTCTTCAATGGAGGGACTGCCATTACAAATGTGCCGTTTCCCGACATACCCCATCACAAATACAACTTTCAGCCTATAGAGAACTTTCTCAAAGGGAGCTTCAAGGCTGATTTGCTTTATGATGTCATAGGTGTTTTACATGAAGTGATTAGGACACAGAGGGGAGGAGATGGTAGGAAGTCTTGCGTCAATATCACTTTACGTGATGTTGAAGGAAACGTTATTGAGGTTGTCTTATGGGATGATTACTGCAAGCAATTCTCGAGTTACAATGCCCCTGCCACACAGAAAAAAGAACCTACTATCATTCTCTTGACACATGCTTGGTGCAAGCCAAACAAAGTTTCTGGTTTACCATCTCTCTCTAATGCATGGAGTGGCTCTCGACTTCACATAAACTTGGAACATCCACAAGTGGAGGAATTCAAAGCTAGATTTGCGGCAATTGATTCATCCAATGCCCCTGCACTTTCCTTAACCTGTGATTCATCTGTTCAATCCGCTAACAACAACTGGAAGAGCCTCGACGAGGTCAGAAGTATCCGTGCAATTGCTGAGTTAAAAAGGGATTGTTTTGCAACCACTATTGGAACTACAAAACATTTCAAAGCTTCAAAGTTTGGCTGGTTTTTTGAGGCATGCCCGGGATGTAAATCTTCTAACAAGTCCCTTGGCGATAAGTTTGAATGTTCATGCGGACTTACCAATGTGGAACCTGTGACTAAATTCAAAATTGAAGTTGAGGTTGTGTATGATAATCACGGTGGTACTTTTGTTTTTTGGGACAAGGATGTTATTCCTTACACAAAATTGAATGCAAAGGAACTTAAACAAGTCATGAAGGAGGCGGGAGAGGATAACCCTAAGATTTGGCCTGCACATCTTGATGTTCTATTGAATAAAGATTTGGTCTTCCGTGTCAAGTACCAATCTGATTTCGACCAATTCTCTATTGTAGCCATACTTAACGGTGACAATTTATACGAAAAGTTTGACAAGTACCTCACGCCTGATGAGCTAAACTCAATTGCCTCTGTCACAGAAATTCCGGAGGATGGTCATACTGAGGACCCAATAGAGGCTAATGTAACACAAGCTTCTGAACCAACAGAATCTGCTCCAATGTCCATTGCTGGCAACAATTCTGGGAGTCCTACTGCCAGCTCCAGCACTACTCCAGCCAAGAGGTTTGCTCCATCAACCTCTATCAATGATGCCATTTTGTCTGAGGAAATTACACCCAAGCAATCTGCCACTAAAGCCAAGCCTATCAGGAAGACTAAGCTTATTAAGAAGGAGTAA 1590 0.4208 MSRAPILIKDLVKGNQVWKMQIRVVDLWVVKEKSGHKHLELVIQDVKGDQIHVTTRSRDFKDWHDQVKEHETYTLYNGEPVVNDGALKVCSNPLKIVFNGGTAITNVPFPDIPHHKYNFQPIENFLKGSFKADLLYDVIGVLHEVIRTQRGGDGRKSCVNITLRDVEGNVIEVVLWDDYCKQFSSYNAPATQKKEPTIILLTHAWCKPNKVSGLPSLSNAWSGSRLHINLEHPQVEEFKARFAAIDSSNAPALSLTCDSSVQSANNNWKSLDEVRSIRAIAELKRDCFATTIGTTKHFKASKFGWFFEACPGCKSSNKSLGDKFECSCGLTNVEPVTKFKIEVEVVYDNHGGTFVFWDKDVIPYTKLNAKELKQVMKEAGEDNPKIWPAHLDVLLNKDLVFRVKYQSDFDQFSIVAILNGDNLYEKFDKYLTPDELNSIASVTEIPEDGHTEDPIEANVTQASEPTESAPMSIAGNNSGSPTASSSTTPAKRFAPSTSINDAILSEEITPKQSATKAKPIRKTKLIKKE 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07814 529 Gene3D - 110 250 IPR012340 -
Vivi1g07814 529 CDD RPA1_DBD_A_like 19 102 - -
Vivi1g07814 529 SUPERFAMILY Nucleic acid-binding proteins 7 108 IPR012340 -
Vivi1g07814 529 Gene3D - 254 430 IPR012340 -
Vivi1g07814 529 MobiDBLite consensus disorder prediction 460 529 - -
Vivi1g07814 529 CDD RPA1_DBD_B_like 137 242 - -
Vivi1g07814 529 Coils Coil 520 529 - -
Vivi1g07814 529 Gene3D - 6 108 IPR012340 -
Vivi1g07814 529 MobiDBLite consensus disorder prediction 460 512 - -
Vivi1g07814 529 SUPERFAMILY Nucleic acid-binding proteins 117 243 IPR012340 -
Vivi1g07814 529 PANTHER OS03G0429900 PROTEIN 5 496 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Vivi1g07814 529 SUPERFAMILY Nucleic acid-binding proteins 267 411 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07814 Vivi-Chr1 212915107 212918269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07814 18 180 Core DNA Replication Machinery Family AT4G19130 23.121 2.94e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07814 - - vvo:131652505 750.355